Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Burkholderia multivorans strain:WS-FJ9

ABSTRACT: Burkholderia multivorans strain:WS-FJ9 Raw sequence reads

PROVIDER: PRJNA323687 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR3607526_1.fastq.gz	Fastqsanger.gz
	SRR3607526_2.fastq.gz	Fastqsanger.gz
	SRR3607528_1.fastq.gz	Fastqsanger.gz
	SRR3607528_2.fastq.gz	Fastqsanger.gz
	SRR3607529_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Phosphate solubilization and gene expression of phosphate-solubilizing bacterium Burkholderia multivorans WS-FJ9 under different levels of soluble phosphate

Project description:Phosphate-solubilizing bacteria (PSB) have the ability to dissolve insoluble phosphate and enhance soil fertility. However, the growth and mineral phosphate solubilization of PSB could be affected by exogenous soluble phosphate and the mechanism has not been fully understood. In the present study, the growth and mineral phosphate-solubilizing characteristics of PSB strain Burkholderia multivorans WS-FJ9 were investigated at six levels of exogenous soluble phosphate (0, 0.5, 1, 5, 10 and 20 mM). The WS-FJ9 strain showed better growth at high levels of soluble phosphate. The phosphate-solubilizing activity of WS-FJ9 reduced as the soluble phosphate concentration increased, as well as the production of pyruvic acid. Transcriptome profiling of WS-FJ9 at three levels of exogenous soluble phosphate (0, 5 and 20 mM) identified 446 differentially expressed genes, among which 44 genes were continuously up-regulated when soluble phosphate concentration increased and 81 genes were continuously down-regulated. Some genes related to cell growth were continuously up-regulated which would account for the better growth of WS-FJ9 at high levels of soluble phosphate. Genes involved in glucose metabolism, including glycerate kinase, 2-oxoglutarate dehydrogenase, and sugar ABC-type transporter were continuously down-regulated which indicates that metabolic channeling of glucose towards phosphorylative pathway was negatively regulated by soluble phosphate.

2017-01-20 | GSE93761 | GEO

Burkholderia multivorans

Project description:Burkholderia multivorans Raw sequence reads

| PRJNA691610 | ENA

Burkholderia multivorans

Project description:Burkholderia multivorans Raw sequence reads

| PRJNA532428 | ENA

Hybridization of Burkholderia multivorans D2095 and D2214 genomic DNA

Project description:Burkholderia cepacia complex (Bcc) comprises opportunistic bacteria infecting hosts such as cystic fibrosis (CF) patients. Bcc long-term infection of CF patient airways has been associated with emergence of phenotypic variation. Here we studied two Burkholderia multivorans clonal isolates (D2095 and D2214) displaying different morphotypes from a chronically infected CF patient in order to evaluate traits development during lung infection. Since the custom array described in platform GPL13356 was based on Burkholderia multivorans ATCC 17616 genome, here we performed a DNA-DNA hybridization to determine which probes of the array hybridize with our test genomes

2011-08-22 | GSE30402 | GEO

Expression data from Burkholderia multivorans mucoid and nonmucoid isolates

Project description:Burkholderia multivorans comprises opportunistic bacteria infecting hosts such as cystic fibrosis (CF) patients. Bcc long-term infection of CF patient airways has been associated with emergence of phenotypic variation including the mucoid-to-nonmucoid colony morphotype. Here we studied three Burkholderia multivorans clonal isolates (mucoid D2095 (BM11L), and nonmucoid D2214G and D2214P) and a laboratory nonmucoid variant (BM11L-nmv1) obtained under prolonged stationary phase. The aim is to identify possible traits associated to the different morphotypes and find possible mechanisms for this morphotypic variation.

2018-06-22 | GSE111467 | GEO

Expression data from Burkholderia multivorans cystic fibrosis clinical isolates

2011-08-22 | GSE28306 | GEO

Burkholderia multivorans reference dataset-experiment 4

Project description:Investigation of Burkholderia multivorans response to low oxygen concentrations under different growth conditions and for different lenghts of time.

2012-05-03 | E-MEXP-3423 | biostudies-arrayexpress

Burkholderia multivorans reference dataset-Experiment 3

Project description:The gene expression of the opportunictic cystic fibrosis lung pathogen Burkholderia multivorans ATCC 17616 was investigated under different growth conditions relevant for growth in the cystic fibrosis lung.

2012-05-11 | E-MEXP-3210 | biostudies-arrayexpress

Burkholderia multivorans reference dataset-Experiment 1

2012-05-10 | E-MEXP-3208 | biostudies-arrayexpress

Burkholderia multivorans reference dataset-Experiment 2

2012-05-11 | E-MEXP-3209 | biostudies-arrayexpress