Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacteria and Archaea

ABSTRACT: Sequence and assemble the genomes of several bacterial and archaeal isolates

PROVIDER: PRJNA324744 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	LZPI01.dat.gz	Other
	LZPI01.fasta.gz	Fasta.gz
	LZPI01.master.dat	Other
	LZPJ01.dat.gz	Other
	LZPJ01.fasta.gz	Fasta.gz

Items per page:

1 - 5 of 40

Similar Datasets

Archaea and Bacteria

Project description:Archaeal and Bacterial communities in and around tubeworms

| PRJNA490800 | ENA

Bacteria and Archaea

Project description:Bacterial and Archaeal 23S Ribosomal RNA RefSeq Targeted Loci Project

| PRJNA188943 | ENA

Bacteria and Archaea

Project description:Bacterial and Archaeal 16S Ribosomal RNA RefSeq Targeted Loci Project

| PRJNA33175 | ENA

Bacteria and Archaea

Project description:Bacterial and Archaeal 5S Ribosomal RNA RefSeq Targeted Loci Project

| PRJNA188106 | ENA

Decoding the chemical language of RiPPs from the untapped Archaea domain

Project description:Chemical communication is crucial in ecosystems with complex microbial assemblages. However, due to archaeal cultivation challenges, our understanding of the structure diversity and function of secondary metabolites (SMs) within archaeal communities is limited compared to the extensively studied and well-documented bacterial counterparts. Our comprehensive investigation into the biosynthetic potential of archaea, combined with metabolic analyses and the first report of heterologous expression in archaea, has unveiled the previously unexplored biosynthetic capabilities and chemical diversity of archaeal ribosomally synthesized and post-translationally modified peptide (RiPP). We have identified twenty-four new lanthipeptides of RiPPs exhibiting unique chemical characteristics, including a novel subfamily featuring an unexplored type with diamino-dicarboxylic (DADC) termini, largely expanding the chemical landscape of archaeal SMs. This sheds light on the chemical novelty of archaeal metabolites and emphasizes their potential as an untapped resource for natural product discovery. Additionally, archaeal lanthipeptides demonstrate specific antagonistic activity against haloarchaea, mediating the unique biotic interaction in the halophilic niche. Furthermore, they showcased a unique ecological role in enhancing the host's motility by inducing the rod-shaped cell morphology and upregulating the archaellum gene flgA1, facilitating the archaeal interaction with abiotic environments. These discoveries broaden our understanding of archaeal chemical language and provide promising prospects for future exploration of SM-mediated interaction.

2024-11-09 | GSE281021 | GEO