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Exophiala mesophila

ABSTRACT: An alkylbenzene-degrading organism

PROVIDER: PRJNA325842 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR1751524_1.fastq.gz	Fastqsanger.gz
	SRR1751524_2.fastq.gz	Fastqsanger.gz
	SRR1751517_1.fastq.gz	Fastqsanger.gz
	SRR1751517_2.fastq.gz	Fastqsanger.gz

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Identification of Exophiala mesophila isolated from treated dental unit waterlines.

Project description:Members of the genus Exophiala are often difficult to identify to the species level because of their variable morphological appearances. This paper describes the methods used to identify Exophiala mesophila and provides salient differential features for distinguishing other mesophilic members of the genus.

| S-EPMC179780 | biostudies-literature

Draft Genome Sequence of an Antarctic Isolate of the Black Yeast Fungus <i>Exophiala mesophila</i>.

Project description:A 30.43-Mb draft genome sequence with 10,355 predicted protein-coding genes was produced for the ascomycete fungus Exophiala mesophila strain CCFEE 6314, a black yeast isolated from Antarctic cryptoendolithic communities. The sequence will be of importance for identifying differences among extremophiles and mesophiles and cataloguing the global population diversity of this organism.

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Exophiala mesophila strain:CBS 40295

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Methylovorus glucosotrophus SIP3-4

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Clinical spectrum of exophiala infections and a novel Exophiala species, Exophiala hongkongensis.

Project description:We characterized 12 Exophiala strains isolated from patients over a 15-year period to the species level using phenotypic tests and internal transcribed spacer (ITS) and Rpb1 sequencing and described the clinical spectrum of the 12 patients. Eight patients had nail or skin infections, two had invasive infections, and two had colonization of the gastrointestinal tract. ITS and Rpb1 sequencing showed that 11 of the 12 strains were known Exophiala species (E. oligosperma [n = 3], E. jeanselmei [n = 2], E. lecanii-corni [n = 2], E. bergeri [n = 1], E. cancerae [n = 1], E. dermatitidis [n = 1], and E. xenobiotica [n = 1]), which included the first reported cases of onychomycosis caused by E. bergeri and E. oligosperma. The 12th strain (HKU32(T)), isolated from the nail clipping of the right big toe of a 68-year-old female patient with onychomycosis, possessed unique morphological characteristics distinct from other Exophiala species. It grew very slowly and had a velvety colony texture after 28 days, short conidiophores of the same olivaceous color as the supporting hyphae, numerous spores, and no chlamydospore-like cells. ITS, Rpb1, ?-tubulin, and ?-actin gene sequencing unambiguously showed that HKU32(T) was clustered with but formed branches distinct from other Exophiala species in phylogenetic trees. We propose the new species Exophiala hongkongensis to describe this novel fungus.

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Genome-resolved meta-omics ties microbial dynamics to process performance in biotechnology for thiocyanate degradation

Project description:The work provides an organism-level framework describing the mechanisms underlying SCN- degradation, and opens possibilities for improving efficiency and nitrogen removal in SCN-degrading bioreactors for bioremediation of Industrial wastewater.

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The transcriptomic and phenotypic response of the melanized yeast Exophiala dermatitidis to ionizing particle exposure

Project description:The yeast E. dermatitidis is highly resistant to ionizing particle irradiation, and exposure to this stress elicits a transcriptomic response that is distinct from that induced by photonic irradiation. Melanin, in this organism, does not exhibit substantial control over this transcriptomic response, nor does it protect the cells from radiation-induced death under the conditions we tested. However, the strong response we observed here at the gene expression level inprovides insights into the unique types of damage that particle irradiation causes to fungal cells, allowing for future dissection of radiation source-specific resistance mechanisms.

2020-06-10 | GSE152116 | GEO

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