Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Schizosaccharomyces pombe

ABSTRACT: Both H4K20 mono-methylation and H3K56 acetylation mark transcription-dependent histone turnover in fission yeast

PROVIDER: PRJNA326310 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR3705670.fastq.gz	Fastqsanger.gz
	SRR3705680.fastq.gz	Fastqsanger.gz
	SRR3705690.fastq.gz	Fastqsanger.gz
	SRR3705671.fastq.gz	Fastqsanger.gz
	SRR3705681.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 34

Similar Datasets

Both H4K20 mono-methylation and H3K56 acetylation mark transcription-dependent histone turnover in fission yeast

Project description:Nucleosome dynamics facilitated by histone turnover is required for transcription as well as DNA replication and repair. Histone turnover is often associated with various histone modifications such as H3K56 acetylation (H3K56Ac), H3K36 methylation (H3K36me), and H4K20 methylation (H4K20me). In order to correlate histone modifications and transcription-dependent histone turnover, we performed genome wide analyses for euchromatic regions in G2/M-arrested fission yeast. The results show that transcription-dependent histone turnover at 5’ promoter and 3’ termination regions is directly correlated with the occurrence of H3K56Ac and H4K20 mono-methylation (H4K20me1) in actively transcribed genes. Furthermore, the increase of H3K56Ac and H4K20me1 and antisense RNA production was observed in the absence of the histone H3K36 methyltransferase Set2 and histone deacetylase complex (HDAC) that are involved in the suppression of histone turnover within the coding regions. These results together indicate that H4K20me1 as well as H3K56Ac are bona fide marks for transcription-dependent histone turnover in fission yeast.

2016-06-21 | GSE83538 | GEO

Schizosaccharomyces pombe

Project description:Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast

| PRJNA92559 | ENA

Schizosaccharomyces pombe

Project description:Fission yeast Cdk7 controls gene expression through both its CAK and CTD kinase activities

| PRJNA137229 | ENA

Hrp3-TAP_Purification from Schizosaccharomyces pombe

Project description:Hrp3_Purification from Schizosaccharomyces pombe 972h- Eukaryotic genome is composed of repeating units of nucleosomes to form chromatin arrays. A canonical gene is marked by nucleosome free region (NFR) at its 5’ end followed by uniformly spaced arrays of nucleosomes. In fission yeast we show both biochemically and in vivo that both Hrp1 and Hrp3 are key determinants of uniform spacing of genic arrays.

2014-05-16 | PXD000041 | Pride

Schizosaccharomyces pombe

Project description:Paf1 complex factors, Leo1 and Paf1, promote local histone turnover to modulate chromatin states in fission yeast [ChIP-exo]

| PRJNA278409 | ENA

Schizosaccharomyces pombe

Project description:Paf1 complex factors, Leo1 and Paf1, promote local histone turnover to modulate chromatin states in fission yeast [ncRNA-Seq]

| PRJNA278408 | ENA

Schizosaccharomyces pombe

Project description:Histone H3 lysine9 acetylation, rather than lysine4 trimethylation, marks meiotic recombination hotspots and promotes recombination initiation in fission yeast

| PRJNA145419 | ENA

Schizosaccharomyces pombe

Project description:A positive feedback loop links opposing functions of P-TEFb/Cdk9 and histone H2B mono-ubiquitylation to regulate transcript elongation in fission yeast

| PRJNA144845 | ENA

Schizosaccharomyces pombe

Project description:Transcription profile of fission yeast

| PRJNA114859 | ENA

Schizosaccharomyces pombe

Project description:fission yeast meiotic drive recombination mapping

| PRJNA376152 | ENA