Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudo-nitzschia multiseries CLN-47

ABSTRACT: Pseudo-nitzschia multiseries genome sequencing project

PROVIDER: PRJNA32659 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR096445.fastq.gz	Fastqsanger.gz
	SRR096446.fastq.gz	Fastqsanger.gz
	SRR096447.fastq.gz	Fastqsanger.gz
	SRR096448.fastq.gz	Fastqsanger.gz
	SRR096449.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Pseudo-nitzschia multiseries

Project description:Pseudo-nitzschia multiseries overview

| PRJNA287468 | ENA

Pseudo-nitzschia multiseries

Project description:Pseudo-nitzschia multiseries Transcriptome or Gene expression

| PRJNA686847 | ENA

Pseudo-nitzschia multiseries strain:CCMP2708

Project description:Pseudo-nitzschia multiseries strain:CCMP2708 Transcriptome or Gene expression

| PRJNA445266 | ENA

Gene expression analysis of late exponential vs. stationary phase cultures using a custom designed Pseudo-nitzschia multiseries (Ps-n) cDNA microarray

2013-09-08 | GSE46845 | GEO

Pseudo-nitzschia multiseries

Project description:Gene expression analysis of late exponential vs. stationary phase cultures using a custom designed Pseudo-nitzschia multiseries (Ps-n) cDNA microarray

| PRJNA202454 | ENA

Pseudo-nitzschia multistriata

Project description:Pseudo-Nitzschia multistriata Project

| PRJNA80045 | ENA

Gene expression analysis of late exponential vs. stationary phase cultures using a custom designed Pseudo-nitzschia multiseries (Ps-n) cDNA microarray

Project description:Pseudo-nitzschia multiseries (Ps-n) is a toxigenic marine diatom that produces the neurotoxin, domoic acid. We screened for candidate genes that may be involved in domoic acid production by determining changes in transcript profiles in Ps-n cultures that were in late exponential (low-domoic-acid-producing) vs. stationary (high-domoic-acid-producing) growth states. We also identified a number of candidate reference genes for future RT-qPCR studies, based on their stability in this study. Ps-n RNA was extracted from late exponential and stationary phase cultures. Experiments included one axenic culture, and two non-axenic cultures. Experiments were dye-swapped to account for differences in dye labeling and detection efficiencies: a) the axenic culture experiment included 4 technical replicate arrays (i.e., 2 dye-swapped experiments = 4 total hybridizations), and b) the non-axenic culture experiments each included 6 technical replicate arrays (i.e., 3 dye-swapped experiments = 6 total hybridizations).

2013-09-08 | E-GEOD-46845 | biostudies-arrayexpress

Pseudo-nitzschia multistriata

Project description:Pseudo-nitzschia multistriata overview

| PRJNA84105 | ENA

Pseudo-nitzschia multistriata

Project description:Pseudo-nitzschia multistriata transcriptome

| PRJNA287788 | ENA

Pseudo-nitzschia sp. YHN1

Project description:Pseudo-nitzschia sp. YHN1 Genome sequencing

| PRJNA1135351 | ENA