Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Terrestrial metagenome

ABSTRACT: Soil and sediment metagenome

PROVIDER: PRJNA327472 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR3747525.fastq.gz	Fastqsanger.gz
	SRR3747526.fastq.gz	Fastqsanger.gz
	SRR4051870.fastq.gz	Fastqsanger.gz
	SRR4051871.fastq.gz	Fastqsanger.gz
	SRR4051872.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

terrestrial metagenome

Project description:Bacteria from soil, sediment and water samples Metagenome

| PRJNA248697 | ENA

terrestrial metagenome

Project description:sediment and groundwater contaminated with RDX Metagenome

| PRJNA302751 | ENA

The preceding root system drives the rhizosphere microbiome

Project description:Background: The soil environment is responsible for sustaining most terrestrial plant life on earth, yet we know surprisingly little about the important functions carried out by diverse microbial communities in soil. Soil microbes that inhabit the channels of decaying root systems, the detritusphere, are likely to be essential for plant growth and health, as these channels are the preferred locations of new root growth. Understanding the microbial metagenome of the detritusphere and how it responds to agricultural management such as crop rotations and soil tillage will be vital for improving global food production. Methods: The rhizosphere soils of wheat and chickpea growing under + and - decaying root were collected for metagenomics sequencing. A gene catalogue was established by de novo assembling metagenomic sequencing. Genes abundance was compared between bulk soil and rhizosphere soils under different treatments. Conclusions: The study describes the diversity and functional capacity of a high-quality soil microbial metagenome. The results demonstrate the contribution of the microbiome from decaying root in determining the metagenome of developing root systems, which is fundamental to plant growth, since roots preferentially inhabit previous root channels. Modifications in root microbial function through soil management, can ultimately govern plant health, productivity and food security.

2020-03-06 | GSE146427 | GEO

terrestrial metagenome

Project description:Tibetan Plateau soil and Ophiocordyceps sinensis Metagenome

| PRJNA272348 | ENA

terrestrial metagenome

Project description:insect, soil and plant metagenome Raw sequence reads

| PRJNA382432 | ENA

Metagenome Sequencing to Explore Phylogenomics of Terrestrial Cyanobacteria.

Project description:Cyanobacteria are ubiquitous microorganisms with crucial ecosystem functions, yet most knowledge of their biology relates to aquatic taxa. We have constructed metagenomes for 50 taxonomically well-characterized terrestrial cyanobacterial cultures. These data will support phylogenomic studies of evolutionary relationships and gene content among these unique algae and their aquatic relatives.

| S-EPMC8354539 | biostudies-literature

terrestrial metagenome

Project description:terrestrial metagenome Metagenome

| PRJNA337739 | ENA

Soil metagenome

Project description:Soil metagenome

| OEX00028456 | NODE

terrestrial metagenome

Project description:Metagenome

| PRJNA271568 | ENA

terrestrial metagenome

Project description:Landfill Metagenome