Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mesoplasma coleopterae strain:BARC 779

ABSTRACT: Mesoplasma coleopterae BARC 779 genome sequencing and assembly

PROVIDER: PRJNA331059 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Mesoplasma tabanidae strain:BARC 857

Project description:Mesoplasma tabanidae BARC 857 genome sequencing and assembly

| PRJNA331060 | ENA

Mesoplasma

Project description:Mesoplasma Genome sequencing and assembly

| PRJNA762720 | ENA

Mesoplasma florum

Project description:Mesoplasma florum Genome sequencing and assembly

| PRJNA412852 | ENA

Mesoplasma entomophilum strain:TAC

Project description:Mesoplasma entomophilum TAC genome sequencing and assembly

| PRJNA331056 | ENA

Mesoplasma entomophilum strain:TAC

Project description:Mesoplasma entomophilum strain:TAC Genome sequencing and assembly

| PRJNA415956 | ENA

Transcriptomic analysis of a moderately growing subisolate Botryococcus braunii 779 (Chlorophyta) in response to nitrogen deprivation

Project description:We report the transcriptomic response of a moderately growing subisolate from the culture of Botryococcus sp. CCALA-779 upon nitrogen deprivation (ND). Examination of transcriptomes upon nitrogen deprivation (ND). B.braunii_non_redundant_transcriptome_assembly_61220.fasta: non-redundant assembly (with 61220 in number) of B.braunii 779 transcriptome in this study B.braunii_annotated_12292.fasta: investigated ESTs (with 12292 in number, which perfectly matches with our processed RNA expression profiling) in this study

2015-08-03 | E-GEOD-71296 | biostudies-arrayexpress

Mesoplasma corruscae strain:ELCA-2

Project description:Mesoplasma corruscae ELCA-2 genome sequencing and assembly

| PRJNA331058 | ENA

Mesoplasma florum W37

Project description:Mesoplasma florum W37 Genome sequencing

| PRJNA222289 | ENA

PBMCs from CCI-779 Treated RCC subjects

Project description:Clinical Pharmacogenomics study. Renal Cell Carcinoma subjects were treated with CCI-779 and peripheral blood mononuclear cells were profiled over time of treatment. Population pharmacokinetics of CCI-779: Correlations to safety and pharmacogenomics responses in patients with advanced renal cancer. Clin Pharm Therapeutics Dec 2004 Keywords: other

2004-12-01 | GSE1982 | GEO

Mesoplasma florum proteome analysis by 2D LC-MS/MS

Project description:The near-minimal bacterium Mesoplasma florum constitutes an interesting model for synthetic genomics and systems biology studies due to its small genome, fast growth rate, and lack of pathogenic potential. However, some fundamental aspects of its biology remain largely unexplored. Here, we report a broad yet remarkably detailed characterization of M. florum by combining a wide variety of experimental approaches. More specifically, we investigated several physical and physiological aspects of this bacterium, and performed the first genome-wide analysis of its transcriptome and proteome using RNA sequencing techniques and two-dimensional liquid chromatography-tandem mass spectrometry. These analyses notably revealed the M. florum consensus promoter, a first experimental cartography of transcription units, as well as the transcription and expression levels of all annotated genes. We also converted gene transcription and expression levels into absolute molecular abundances using biomass quantification results, generating an unprecedented view of the M. florum cellular composition and functions. These characterization efforts will provide an experimental foundation for the development of a genome-scale metabolic model for M. florum and will guide future genome engineering endeavours in this simple organism.

2020-11-16 | PXD019922 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data