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Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

ABSTRACT: Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 4 epigenomics

PROVIDER: PRJNA333135 | ENA |

REPOSITORIES: ENA

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Time Course of Laccaria bicolor S238N and Populus tremula x alba 717-1B4 in vitro ectomycorrhizal development

Project description:Illumina technology was used to generate mRNA profiles of a time course of Laccaria bicolor S238N and Populus tremula x alba 717-1B4 in vitro ectomycorrhizal development. Total RNA was extracted, TruSeq mRNA Stranded libraries were constructed and and sequenced in triplicates (2 x 150 bp Illumina HiSeq3000) at the Genotoul sequencing facilities (Toulouse, France). Raw reads were trimmed for low quality (quality score 0.05), Illumina adapters and sequences shorter than 15 nucleotides and aligned to the L. bicolor v2 reference transcripts available at the JGI database https://mycocosm.jgi.doe.gov/Lacbi2/Lacbi2.home.html using CLC Genomics Workbench v8.

2021-12-15 | GSE190443 | GEO

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 10 epigenomics

| PRJNA333103 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 17 epigenomics

| PRJNA333110 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 38 epigenomics

| PRJNA333133 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 14 epigenomics

| PRJNA333107 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 18 epigenomics

| PRJNA333111 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 22 epigenomics

| PRJNA333116 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 23 epigenomics

| PRJNA333117 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 27 epigenomics

| PRJNA333121 | ENA

Populus tremula x Populus alba strain:717-1B4 | cultivar:717-1B4

Project description:Populus tremula × alba 717-1B4 Bisulfite Sequencing - sample 28 epigenomics

| PRJNA333122 | ENA

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