Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Zea mays strain:IHP1 | cultivar:IHP1

ABSTRACT: Zea mays IHP1 Standard Draft genome sequencing

PROVIDER: PRJNA333976 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10445793_1.fastq.gz	Fastqsanger.gz
	SRR10445793_2.fastq.gz	Fastqsanger.gz
	SRR10445794_1.fastq.gz	Fastqsanger.gz
	SRR10445794_2.fastq.gz	Fastqsanger.gz
	SRR10445795_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Zea mays cultivar:W22 Transcriptome or Gene expression

Project description:Large scale transcriptomics study to establish gene expression in leaf tissue of W22 inbred line in Zea Mays. RNA was extracted from leaf tissue when the plants were at V6. Sequencing library was produced following the protocol mentioned in the following publication PMID:22039485

2015-04-29 | E-MTAB-4446 | biostudies-arrayexpress

Zea mays cultivar:PHB47

Project description:Zea mays PHB47 Standard Draft genome sequencing

| PRJNA701650 | ENA

Zea mays cultivar:LH145

Project description:Zea mays LH145 Standard Draft genome sequencing

| PRJNA701651 | ENA

Zea mays cultivar:NKH8431

Project description:Zea mays NKH8431 Standard Draft genome sequencing

| PRJNA701653 | ENA

Zea mays cultivar:PHJ40

Project description:Zea mays PHJ40 Standard Draft genome sequencing

| PRJNA701652 | ENA

Zea mays cultivar:B84

Project description:Zea mays B84 Standard Draft genome sequencing

| PRJNA701654 | ENA

Zea mays strain:LHP1 | cultivar:LHP1

Project description:Zea mays LHP1 Standard Draft genome sequencing

| PRJNA333977 | ENA

Zea mays subsp. mays Transcriptome or Gene expression

Project description:Zea mays subsp. mays Transcriptome or Gene expression Atlas.

2012-09-13 | E-MTAB-4342 | biostudies-arrayexpress

Zea mays Epigenomics

Project description:RNA-directed DNA methylation (RdDM) in plants is a well-characterized example of RNA interference-related transcriptional gene silencing. To determine the relationships between RdDM and heterochromatin in the repeat-rich maize (Zea mays) genome, we performed whole-genome analyses of several heterochromatic features: dimethylation of lysine 9 and lysine 27 (H3K9me2 and H3K27me2), chromatin accessibility, DNA methylation, and small RNAs; we also analyzed two mutants that affect these processes, mediator of paramutation1 and zea methyltransferase2.

2014-12-05 | E-MTAB-4191 | biostudies-arrayexpress

Whole transcriptome analysis of coding and non-coding RNAs associated with Spodoptera frugiperda feeding in Zea mays

Project description:We report the application of whole transcriptome sequencing technology for high-throughput profiling of coding and non-coding RNAs associated with Spodoptera frugiperda feeding in Zea mays. 4,366 mRNAs and 233 lncRNAs were differentially expressed during Spodoptera frugiperda feeding in Zea mays. Our data contribute to the understanding of the function of coding and non-coding RNAs in the regulation of plant-insect interactions.

2023-11-21 | GSE247976 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data