Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sphingomonas koreensis strain:JSS26

ABSTRACT: Sphingomonas koreensis JSS26 genome sequencing

PROVIDER: PRJNA333987 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	PGEN01.dat.gz	Other
	PGEN01.fasta.gz	Fasta.gz
	PGEN01.master.dat	Other
	SRR4142450_subreads.fastq.gz	Fastqsanger.gz
	SRR4142451_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 10

Similar Datasets

Sphingomonas koreensis

Project description:Sphingomonas koreensis overview

| PRJNA172494 | ENA

Sphingomonas koreensis strain:ABYUT

Project description:Sphingomonas koreensis strain:ABYUT Genome sequencing

| PRJNA385998 | ENA

Sphingomonas koreensis strain:ABYUV

Project description:Sphingomonas koreensis strain:ABYUV Genome sequencing

| PRJNA386000 | ENA

Sphingomonas koreensis NBRC 16723

Project description:Sphingomonas koreensis NBRC 16723 genome sequencing project

| PRJDB325 | ENA

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed.

2014-11-01 | GSE62901 | GEO

Sphingomonas koreensis strain:JSS26 | isolate:DSMZ 15582

Project description:Sphingomonas koreensis JSS26 DAP-Seq epigenomics

| PRJNA757871 | ENA

Sphingomonas koreensis NBRC 16723 isolate:NBRC 16723

Project description:Sphingomonas koreensis NBRC 16723 Transposon Mutagenesis Sequencing other

| PRJNA519667 | ENA

Expression analysis of motile strain of Sphingomonas sp. A1

Project description:Investigation of whole genome gene expression level in motile strain of Sphingomonas. sp A1 All flagellar genes in motile strain of Sphingomonas. sp A1 are highly transcribed. A two chip study using total RNA recovered from wild-type and motile strains of Sphingomonas. sp A1 grown in 0.5% alginate medium.

2014-11-01 | E-GEOD-62901 | biostudies-arrayexpress

Organic Nitrogen Source is Critical for Welan Production in Sphingomonas sp. ATCC 31555

Project description:Welan gum is mainly produced by Sphingomonas sp. ATCC 31555 and has broad applications in industry such as that in cement production. Both carbon and nitrogen sources are essential for welan production. However, how nitrogen sources affect the metabolism and gene transcription of welan remains elusive. Here, we used next-generation sequencing RNA-seq to analyze the transcriptome of Sphingomonas sp. ATCC 31555 in the presence of inorganic or organic nitrogen sources. Enriched gene expression and pathway analysis suggest that organic nitrogen sources significantly enhanced the expression of genes in central metabolic pathways of Sphingomonas sp. ATCC 31555 and those critical for welan synthesis compared to that observed using inorganic nitrogen sources. The present study improves our understanding of the molecular mechanism underlying the use of nitrogen in welan synthesis in Sphingomonas sp., as well as provides an important transcriptome resource for Sphingomonas sp. in relation to nitrogen sources.

2016-03-25 | GSE79497 | GEO

Pseudoxanthomonas koreensis

Project description:Pseudoxanthomonas koreensis Genome sequencing

| PRJNA1151831 | ENA