Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Shigella sp. FC1567

ABSTRACT: Shigella sp. FC1567 Genome sequencing and assembly

PROVIDER: PRJNA341903 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	MIIV01.dat.gz	Other
	MIIV01.fasta.gz	Fasta.gz
	MIIV01.master.dat	Other
	MIIV01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

Shigella CGH

Project description:Background Compelling evidence indicates that Shigella species, the etiologic agents of bacillary dysentery, as well as enteroinvasive Escherichia coli, are derived from multiple origins of Escherichia coli and form a single pathovar. To further understand the genome diversity and virulence evolution of Shigella, comparative genomic hybridization microarray analysis was employed to compare the gene content of E. coli K-12 with those of 43 Shigella strains from all serotypes. Results For the 43 strains subjected to CGH microarray analyses, the common backbone of the Shigella genome was estimated to contain more than 1,900 open reading frames, with a mean number of 729 undetectable ORFs. The mosaic distribution of absent regions indicated that insertions and/or deletions have led to the highly diversified genomes of pathogenic strains. Conclusion These results support the hypothesis that by gain and loss of functions, Shigella species became successful human pathogens through convergent evolution from diverse genomic backgrounds. Moreover, we also found many specific differences between different lineages, providing a window into understanding bacterial speciation and taxonomic relationships. Keywords: comparative genomic hybridization

2007-07-01 | GSE5212 | GEO

Shigella sp. FC569

Project description:Shigella sp. FC569 Genome sequencing and assembly

| PRJNA339982 | ENA

Shigella sp. FC2117

Project description:Shigella sp. FC2117 Genome sequencing and assembly

| PRJNA342379 | ENA

Shigella sp. FC2125

Project description:Shigella sp. FC2125 Genome sequencing and assembly

| PRJNA342382 | ENA

Shigella sp. FC2531

Project description:Shigella sp. FC2531 Genome sequencing and assembly