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Bioreactor metagenome

ABSTRACT: sample of biodigestor operated from different nutrient Metagenome

PROVIDER: PRJNA344418 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR4297700_1.fastq.gz	Fastqsanger.gz
	SRR4297700_2.fastq.gz	Fastqsanger.gz
	SRR4297701_1.fastq.gz	Fastqsanger.gz
	SRR4297701_2.fastq.gz	Fastqsanger.gz
	SRR4297702_1.fastq.gz	Fastqsanger.gz

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Identification of TBBPA-degraders in anaerobic bioreactor at environmentally relevant concentrations by combined protein-based stable isotope probing and metagenomics

Project description:The aim of this study was to identify TBBPA-degrading organisms in a complex microbial community by a metagenome-based functional metaproteomic approach, using protein-based stable isotope probing (protein-SIP). Firstly, the degradation kinetics were evaluated in order to simulate the decrease of residual mass of the labelled compound based on experimental data. In sequence, a metagenome was generated, and biomass was collected in different time-points for protein-SIP in incubations with 13C-TBBPA. This approach allowed for the identification organisms assimilating labelled carbon from the cometabolic degradation of a micropollutant.

2022-09-12 | PXD030335 | Pride

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