Bos taurus Camelus bactrianus Camelus ferus
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ABSTRACT:
PROVIDER: PRJNA347522 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:16S rRNA hypervariable region V4 sequencing in Bactrian Camels and Cattle
| PRJNA344803 | ENA
Project description:The evolutionary relationship between the domestic bactrian camel and the extant wild two-humped camel and the factual origin of the domestic bactrian camel remain elusive. We determined the sequence of mitochondrial cytb gene from 21 camel samples, including 18 domestic camels (three Camelus bactrianus xinjiang, three Camelus bactrianus sunite, three Camelus bactrianus alashan, three Camelus bactrianus red, three Camelus bactrianus brown and three Camelus bactrianus normal) and three wild camels (Camelus bactrianus ferus). Our phylogenetic analyses revealed that the extant wild two-humped camel may not share a common ancestor with the domestic bactrian camel and they are not the same subspecies at least in their maternal origins. Molecular clock analysis based on complete mitochondrial genome sequences indicated that the sub-speciation of the two lineages had begun in the early Pleistocene, about 0.7 million years ago. According to the archaeological dating of the earliest known two-humped camel domestication (5000-6000 years ago), we could conclude that the extant wild camel is a separate lineage but not the direct progenitor of the domestic bactrian camel. Further phylogenetic analysis suggested that the bactrian camel appeared monophyletic in evolutionary origin and that the domestic bactrian camel could originate from a single wild population. The data presented here show how conservation strategies should be implemented to protect the critically endangered wild camel, as it is the last extant form of the wild tribe Camelina.
| S-EPMC2721964 | biostudies-literature
Project description:Bactrian camel (Camelus bactrianus) is a large, even-toed ungulate native to the desert areas of Central Asia. Aggregated lymphoid nodules area (ALNA) is known as the special anatomical structure of a Bactrian camel’s stomach that is found in the cardiac glandular area of the abomasum. To advance the exploration of the mucosal immune function of this anatomical feature within the gastrointestinal tract, we quantified the expressed proteins in ALNA using iTRAQ-based proteomic analysis in 6 Bactrian camels. In the experiment, we sampled the reticular mucosal folds region (RMFR) and longitudinal mucosal folds region (LMFR) separately from the ALNA and compared their proteomic quantification results with the samples from the Peyer’s patches (PPs).
2023-04-20 | PXD041670 |
Project description:The Bactrian Camel Genome Sequencing Project
| PRJNA183605 | ENA
Project description:The family Camelidae that evolved in North America during the Eocene survived with two distinct tribes, Camelini and Lamini. To investigate the evolutionary relationship between them and to further understand the evolutionary history of this family, we determined the complete mitochondrial genome sequence of the wild two-humped camel (Camelus bactrianus ferus), the only wild survivor of the Old World camel.The mitochondrial genome sequence (16,680 bp) from C. bactrianus ferus contains 13 protein-coding, two rRNA, and 22 tRNA genes as well as a typical control region; this basic structure is shared by all metazoan mitochondrial genomes. Its protein-coding region exhibits codon usage common to all mammals and possesses the three cryptic stop codons shared by all vertebrates. C. bactrianus ferus together with the rest of mammalian species do not share a triplet nucleotide insertion (GCC) that encodes a proline residue found only in the nd1 gene of the New World camelid Lama pacos. This lineage-specific insertion in the L. pacos mtDNA occurred after the split between the Old and New World camelids suggests that it may have functional implication since a proline insertion in a protein backbone usually alters protein conformation significantly, and nd1 gene has not been seen as polymorphic as the rest of ND family genes among camelids. Our phylogenetic study based on complete mitochondrial genomes excluding the control region suggested that the divergence of the two tribes may occur in the early Miocene; it is much earlier than what was deduced from the fossil record (11 million years). An evolutionary history reconstructed for the family Camelidae based on cytb sequences suggested that the split of bactrian camel and dromedary may have occurred in North America before the tribe Camelini migrated from North America to Asia.Molecular clock analysis of complete mitochondrial genomes from C. bactrianus ferus and L. pacos suggested that the two tribes diverged from their common ancestor about 25 million years ago, much earlier than what was predicted based on fossil records.
| S-EPMC1939714 | biostudies-literature
Project description:ORG.one project - Bactrian camel (Camelus bactrianus)
| PRJEB74254 | ENA
Project description:Adipose tissues transcriptome data of Bactrian camel
| PRJNA471391 | ENA