Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Homo sapiens

ABSTRACT: Gene expression of collecting duct carcinoma of the kidney

PROVIDER: PRJNA350320 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR4448020_1.fastq.gz	Fastqsanger.gz
	SRR4448020_2.fastq.gz	Fastqsanger.gz
	SRR4448021_1.fastq.gz	Fastqsanger.gz
	SRR4448021_2.fastq.gz	Fastqsanger.gz
	SRR4448022_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 26

Similar Datasets

Homo sapiens

Project description:Exome sequencing of collecting duct carcinoma of the kidney

| PRJNA315875 | ENA

MicroRNA (miRNA) expression of IMCD tubule suspension

2014-06-21 | GSE58693 | GEO

Gene expression analysis of collecting duct carcinoma

Project description:Gene expression analysis of collecting duct carcinoma

| PRJNA644615 | ENA

Homo sapiens

Project description:Comprehensive molecular characterization of collecting duct carcinoma for therapeutic vulnerability

| PRJNA1004347 | ENA

Gene expression regulated by AGN193109 and 4-diehtylaminobenzaldehyde (DEAB) in mIMCD-3 cells

Project description:All-trans retinoic acid (tRA) is the bioactive derivative of vitamin A that regulates gene expression by activating RA receptors (RAR). By using a reporter mouse model, we recently showed that endogenous tRA/RAR signaling was present in kidney collecting duct cells, and in mouse inner medullary collecting duct cell line (mIMCD-3). In order to unveil target genes of endogenous tRA/RAR signaling in kidney collecting duct cells, whole genome microarray analysis was performed on mIMCD-3 cells treated with AGN193109, a pan-RAR antagonist, and 4-diethylaminobenzaldehyde (DEAB), an inhibitor of tRA synthesizing enzyme. Specificity of gene expression regulation was confirmed by determining the reversibility of the regulation by simultaneous addition of exogenous tRA.

2011-11-26 | GSE33955 | GEO

Gestational high salt stressed new born BdkrB2 knockout collecting duct cells vs BdkrB2 wild type collecting duct cells

Project description:Transcriptional profiling of new born mouse kidney collecting duct (CD) cells comparing the infuence of gestational high salt stress on gene expression remolding of BdkrB2 receptor knockout CD cells with that of BdkrB2 receptor wild type CD cells. The BdkrB2 receptor has been shown to be playing a role in renal vascular tone, kidney secretion and reabsorption function, normal kidney development, while impaired BdkrB2 receptor in kidney shown being associated with renal agenesis and renal dysplasia. Goal was to determine the effects of BdkrB2 receptor knockout together with gestational high salt stress on collecting duct gene expression pattern.

2013-08-08 | GSE49616 | GEO

MicroRNA (miRNA) expression of IMCD tubule suspension

Project description:miRNA plays a role as post-transcriptional regulator. However, miRNAs in the kidney collecting duct cell have not been well understood. So we aimed to profile miRNAs in the kidney inner medullary collecting duct (IMCD) cells, and to identify the vasopressin-responsive miRNAs in the kidney IMCD cells. The microarray assay revealed that relative expression of miRNAs in the kidney IMCD cells was changed by desmopressin (dDAVP) stimulation. Fresh IMCD tubules were prepared from rat kidney and incubated in the medium in the absence or presence of dDAVP (1 nM, 2 h). Total RNA purified from IMCD tubules was used to analyze miRNA expression by GeneChipM-BM-. miRNA 3.0 Array (Affymetrix).

2014-06-21 | E-GEOD-58693 | biostudies-arrayexpress

Gestational high salt stressed new born BdkrB2 knockout collecting duct cells vs BdkrB2 wild type collecting duct cells

2013-08-08 | E-GEOD-49616 | biostudies-arrayexpress

PRRUB FACS cells microarray

Project description:This experiment aimed to uncover the genome-wide alternation in gene expression resulting from the removal of PRR from the population ureteric bud and collecting duct and successive changes to the series of events in kidney development.

2016-10-15 | GSE88787 | GEO

Mus musculus

Project description:The kidney collecting duct acid-base regulon

| PRJNA95661 | ENA