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Ovis aries

ABSTRACT: Transcriptome analysis in sheep Milk Somatic Cells

PROVIDER: PRJNA350511 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR4449914_1.fastq.gz	Fastqsanger.gz
	SRR4449914_2.fastq.gz	Fastqsanger.gz
	SRR4449915_1.fastq.gz	Fastqsanger.gz
	SRR4449915_2.fastq.gz	Fastqsanger.gz
	SRR4449916_1.fastq.gz	Fastqsanger.gz

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Ovis aries

Project description:Sheep milk transcriptome

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MeDIP sequencing of Ovis aries

Project description:We have completed the high quality reference genome for domestic sheep (Oar v3.1). Early-stage Illumina GA sequence platform sequenced less reads in high GC content regions than in other regions. To read through higher GC content regions, we generated 2 Gb MeDIP-seq data for filling gaps in sheep reference genome assembly.

2014-06-06 | E-GEOD-56644 | biostudies-arrayexpress

Transcriptome sequencing of Ovis aries

2014-06-06 | GSE56643 | GEO

MeDIP sequencing of Ovis aries

Project description:We have completed the high quality reference genome for domestic sheep (Oar v3.1).

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Ovis aries

Project description:Transcriptomic analysis of milk somatic cells in mastitis resistant and susceptible sheep upon challenge with Staphylococcus epidermidis and Staphylococcus aureus

| PRJNA132179 | ENA

Transcriptome sequencing of Ovis aries

Project description:We have completed the high quality reference genome for domestic sheep (Oar v3.1) and performed a detailed survey of gene expression across different tissues. RNA-seq data of 7 tissue types from the reference female Texel and skin tissue from a Gansu alpine fine wool sheep were sequenced. Here is the part of the RNA-seq data sequenced in BGI, including 7 tissue types from the reference female Texel and skin type from a Gansu alpine fine wool sheep.

2014-06-06 | E-GEOD-56643 | biostudies-arrayexpress

Global gene expression profiling following a dietary selenium supplementation in sheep (Ovis aries).

Project description:In the present study, we studied the effect of dietary selenium (Se) supplementation on the transcriptomic profile of sheep. The main objective was to evaluate the effect of Se-supplementation on the overall transcriptome of sheep, the altered pathways, and the biological processes related to it . A custom oligo microarray platform (AMADID: 070119) was designed, then used to profile gene expression from 20 samples from 10 sheep at two time points (T0; before Se-supplementation, and T40; at the end of a 40-d Se-supplementation period). Isolated and purified total RNAs were individually hybridized to the custom (4x44k) DNA microarray. The comparison of control and treated animal transcriptomes revealed a large set of differentially expressed genes. After functional analysis and qPCR validation, the result showed several pathways and biological processes that have been altered following Se-supplementation to the diet.

2016-04-26 | GSE69997 | GEO

Ovis aries

Project description:Sheep Genome Analysis

| PRJNA1057128 | ENA

Ovis aries

Project description:Transcriptome Sequencing and Analysis of Three Sheep Intestinal Regions

| PRJNA358249 | ENA

Identification of reproduction-related genes in the hypothalamus of the sheep (Ovis aries) using the ONT full-length transcriptome sequencing technology

Project description:the hypothalamus tissues of high-reproduction small-tailed Han sheep and low-reproduction Wadi sheep were collected, and full-length transcriptome sequencing by Oxford Nanopore Technologies (ONT) was performed to explore the key functional genes associated with sheep fecundity. The differentially expressed genes (DEGs) were screened and enriched using DESeq2 software through Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG).

2024-11-20 | GSE275445 | GEO

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