Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Archaeoglobus fulgidus

ABSTRACT: Thermophilic sulfate-reducing archaeon

PROVIDER: PRJNA35103 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR4136262_1.fastq.gz	Fastqsanger.gz
	SRR4136262_2.fastq.gz	Fastqsanger.gz
	SRR4136263_1.fastq.gz	Fastqsanger.gz
	SRR4136263_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Archaeoglobus fulgidus DSM 4304

Project description:Hyperthermophilic sulfate-reducing archaeon

| PRJNA104 | ENA

Assessment of the carbon monoxide metabolism of the hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus VC-16 by comparative transcriptome analyses

Project description:The metabolic versatile hyperthermophilic dissimilatory sulfate-reducing archaeon, Archaeoglobus fulgidus VC-16, both utilize carbon monoxide as energy source and is highly resistant to toxic effects of CO. This metabolic capacity was investigated by transcriptional response to growth with CO of cultures supplemented with sulfate (S-CO) or thiosulfate (T-CO), and without external electron acceptor (CO-without election acceptor ).

2015-04-30 | E-MTAB-3035 | biostudies-arrayexpress

Trancriptional profiling of A. fulgidus VC16

Project description:Transcriptional response of the hyperthermophilic sulfate reducing archaeon Archaeoglobus fulgidus VC16 to lithoautotrohpic and heterotrophic growth conditions

2014-03-10 | E-MTAB-2294 | biostudies-arrayexpress

Desulfofundulus kuznetsovii

Project description:Thermophilic sulfate-reducing bacterium

| PRJNA52651 | ENA

Thermodesulfatator indicus

Project description:Thermophilic sulfate-reducing bacterium

| PRJNA40097 | ENA

Heat shock response of Archaeoglobus fulgidus.

Project description:The heat shock response of the hyperthermophilic archaeon Archaeoglobus fulgidus strain VC-16 was studied using whole-genome microarrays. On the basis of the resulting expression profiles, approximately 350 of the 2,410 open reading frames (ORFs) (ca. 14%) exhibited increased or decreased transcript abundance. These span a range of cell functions, including energy production, amino acid metabolism, and signal transduction, where the majority are uncharacterized. One ORF called AF1298 was identified that contains a putative helix-turn-helix DNA binding motif. The gene product, HSR1, was expressed and purified from Escherichia coli and was used to characterize specific DNA recognition regions upstream of two A. fulgidus genes, AF1298 and AF1971. The results indicate that AF1298 is autoregulated and is part of an operon with two downstream genes that encode a small heat shock protein, Hsp20, and cdc48, an AAA+ ATPase. The DNase I footprints using HSR1 suggest the presence of a cis-binding motif upstream of AF1298 consisting of CTAAC-N5-GTTAG. Since AF1298 is negatively regulated in response to heat shock and encodes a protein only distantly related to the N-terminal DNA binding domain of Phr of Pyrococcus furiosus, these results suggest that HSR1 and Phr may belong to an evolutionarily diverse protein family involved in heat shock regulation in hyperthermophilic and mesophilic Archaea organisms.

| S-EPMC1196131 | biostudies-literature

Thermodesulfovibrio yellowstonii DSM 11347

Project description:A thermophilic sulfate-reducing bacterium.

| PRJNA30733 | ENA

Thermodesulfomicrobium

Project description:Isolation of thermophilic sulfate-reducing bacteria

| PRJDB14907 | ENA

Structure of GlnK1, a signalling protein from Archaeoglobus fulgidus.

Project description:GlnB and GlnK are ancient signalling proteins that play a crucial role in the regulation of nitrogen assimilation. Both protein types can be present in the same genome as either single or multiple copies. However, the gene product of glnK is always found in an operon together with an amt gene encoding an ammonium-transport (Amt) protein. Complex formation between GlnK and Amt blocks ammonium uptake and depends on the nitrogen level in the cell, which is regulated through the binding of specific effector molecules to GlnK. In particular, an ammonium shock to a cell culture previously starved in this nitrogen source or the binding of ATP to purified GlnK can stimulate effective complex formation. While the binding of ATP/ADP and 2-oxoglutarate (as a signal for low intracellular nitrogen) to GlnK have been reported and several GlnB/K protein structures are available, essential functional questions remain unanswered. Here, the crystal structure of A. fulgidus GlnK1 at 2.28 Å resolution and a comparison with the crystal structures of other GlnK proteins, in particular with that of its paralogue GlnK2 from the same organism, is reported.

| S-EPMC3034604 | biostudies-literature

Archaeoglobus fulgidus DSM 8774

Project description:Archaeoglobus fulgidus DSM 8774 Genome sequencing

| PRJNA208006 | ENA