Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Xenopus tropicalis x Xenopus laevis

ABSTRACT: Single-base resolution methylomes of Xenopus laevis x Xenopus tropicalis embryos

PROVIDER: PRJNA356296 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5077840.fastq.gz	Fastqsanger.gz
	SRR5077850.fastq.gz	Fastqsanger.gz
	SRR5077860.fastq.gz	Fastqsanger.gz
	SRR5077870.fastq.gz	Fastqsanger.gz
	SRR5077880.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 54

Similar Datasets

Next generation sequencing identifies differentially localized transcripts in Xenopus laevis and Xenopus tropicalis oocytes

Project description:RNA-seq technology was used to identify differentially localized transcripts from Xenopus laevis and Xenopus tropicalis stage VI oocytes. Besides the discovery of a group of novel animally enriched RNAs, this study revealed a surprisingly low conservation of vegetal RNA localization between the two frog species. mRNA profiles of Xenopus laevis and Xenopus tropicalis animal and vegetal oocyte halves were generated by RNA-seq technology. For Xenopus laevis, animal and vegetal oocyte RNA preparations from two different females were generated in duplicates. For Xenopus tropicalis, animal and vegetal oocyte RNA preparations from two different females were analyzed.

2015-12-09 | E-GEOD-58420 | biostudies-arrayexpress

Xenopus laevis

Project description:Single-base resolution methylome of Xenopus laevis embryos

| PRJNA306718 | ENA

Xenopus tropicalis x Xenopus laevis

Project description:Xenopus tropicalis x Xenopus laevis overview

| PRJNA928808 | ENA

Single-base resolution methylome of Xenopus laevis embryos

Project description:Here we describe a base-resolution DNA methylation map of Xenopus laevis gastrula (st.10.5) embryos generated by whole genome bisulfite sequencing

2016-08-26 | GSE76247 | GEO

Next generation sequencing identifies differentially localized transcripts in Xenopus laevis and Xenopus tropicalis oocytes

2015-12-09 | GSE58420 | GEO

Single-base resolution methylomes of Xenopus laevis x Xenopus tropicalis embryos

Project description:Genome duplication has played a pivotal role in the evolution of many eukaryotic lineages, including the vertebrates. The most recent vertebrate genome duplication is that in Xenopus laevis, which resulted from the hybridization of two closely related species about 17 million years ago. Here we generated epigenetic profiles and determined gene expression in X.laevis embryos to study the consequences of this duplication at the level of the genome, the epigenome, and gene expression.

2017-09-28 | GSE90898 | GEO

ChIP-sequencing in stage 10.5 Xenopus laevis embryos

Project description:Epigenomic profiling (H3K4me1, H3K4me3, H3K36me3, p300 and RNA Polymerase II) of Xenopus laevis stage 10.5 embryos.

2016-10-28 | GSE76059 | GEO