Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bacteria exposure experiment North Sea

PROVIDER: PRJNA360358 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5150130_1.fastq.gz	Fastqsanger.gz
	SRR5150130_2.fastq.gz	Fastqsanger.gz
	SRR5150140_1.fastq.gz	Fastqsanger.gz
	SRR5150140_2.fastq.gz	Fastqsanger.gz
	SRR5150150_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 272

Similar Datasets

Transcription profiling of Platichthys flesus (flounder) from the North Sea and the Baltic sea and their reactions on being exposed to water of different salinities

Project description:The experiment compared flounder from the North Sea and the Baltic sea and their reactions on being exposed to water of different salinities

2006-12-20 | E-MAXD-22 | biostudies-arrayexpress

Abyssorchomene distinctus LC-MSMS with TMT Labeling

Project description:Despite the fact that deep sea mining is becoming more popular nowadays in terms of obtaining metals ores for daily life purposes, its potential impact to the deep sea habitat, which is originally stable and converse, stills remains uncertain. In order to estimate and regulate the imapct of deep sea mining activities, an in-situ exposure experiment is performed to observe the change in proteomics expression of the deep-sea scvangers, Abyssorchomene distinctus, to copper exposure. This project aims to suggest a potenial protein bio-marker in Abyssorchomene distinctus to assess the impact of mining activities towards deep sea organisms and also discuss the potential application of other deep sea in-situ exposure experiment in the future.

2019-10-30 | PXD012778 | Pride

Proteome analyses of marine particle-associated microbes

Project description:Marine microalgae (phytoplankton) mediate almost half of the worldwide photosynthetic carbon dioxide fixation and therefore play a pivotal role in global carbon cycling, most prominently during massive phytoplankton blooms. Phytoplankton biomass consists of considerable proportions of polysaccharides, substantial parts of which are rapidly remineralized by heterotrophic bacteria. We analyzed the diversity, activity and functional potential of such polysaccharide-degrading bacteria in different size fractions during a diverse spring phytoplankton bloom at Helgoland Roads (southern North Sea) at high temporal resolution using microscopic, physicochemical, biodiversity, metagenome and metaproteome analyses.

2024-01-15 | PXD046705 | Pride

Whole organism transcriptomic analysis provides mechanistic insight into the acute toxicity of emamectin benzoate in Daphnia magna

Project description:This experiment was conducted to study the short-term (12h) transcriptional responses in Daphnia magna after exposure to the anti-sea lice chemical emamectin benzoate (EMB). The microarray results were further vefiried using qPCR. The gene exression responses were linked to adverse effects after 48h exposure, in order to supply knowledge for environmental hazard assessment of this chemical in non-target crustaceans.

2016-06-30 | GSE83859 | GEO

Role of thiosulfate as a source of energy in the bathypelagic North Atlantic Ocean

Project description:The available energy and carbon sources for prokaryotes in the deep ocean remain still largely enigmatic. Reduced sulfur compounds, such as thiosulfate, are a potential energy source for both auto- and heterotrophic marine prokaryotes. Shipboard experiments performed in the North Atlantic using Labrador Sea Water (~2000 m depth) amended with thiosulfate led to an enhanced prokaryotic dissolved inorganic carbon (DIC) fixation.

2021-04-30 | GSE136729 | GEO

Spring phytoplankton bloom in the North Sea during the 2016 spring bloom

Project description:The dataset represents the proteome analysis of six sampling dates during the phytoplankton bloom at the island of Helgoland in the North Sea at the long term research station ‘Kabeltonne’ (54° 11' 17.88'' N, 7° 54' 0'' E) in 2016.

2020-12-15 | PXD019294 | Pride

marine metagenome

Project description:North Sea DOM bacteria and dynamics Targeted Locus (Loci)

| PRJNA279134 | ENA

Spring phytoplankton bloom in the North Sea during the 2020 Spring phytoplankton bloom in the North Sea during the 2020 spring bloom – free-living bacteria

Project description:The dataset represents the proteome analysis of 15 sampling dates during the phytoplankton bloom in the Helgoland Roads in the North Sea at the long-term research station ‘Kabeltonne’ (54°11'N 7°54'E, DEIMS.ID https://deims.org/1e96ef9b-0915-4661-849f-b3a72f5aa9b1) in 2020.

2024-04-09 | PXD042805 | Pride

Spring phytoplankton bloom in the North Sea during the 2018 spring bloom – free-living Spring phytoplankton bloom in the North Sea during the 2018 spring bloom – free-living bacteriabacteria

Project description:The dataset represents the proteome analysis of 7 sampling dates during the phytoplankton bloom in the Helgoland Roads in the North Sea at the long-term research station ‘Kabeltonne’ (54°11'N 7°54'E, DEIMS.ID https://deims.org/1e96ef9b-0915-4661-849f-b3a72f5aa9b1) in 2018.

2024-01-15 | PXD042676 | Pride

Project description:Microplastic exposure experiment

| PRJNA744749 | ENA