Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Adaptive introgression in high elevation dog populations

PROVIDER: PRJNA361023 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5168995_1.fastq.gz	Fastqsanger.gz
	SRR5168995_2.fastq.gz	Fastqsanger.gz
	SRR5168996_1.fastq.gz	Fastqsanger.gz
	SRR5168996_2.fastq.gz	Fastqsanger.gz
	SRR5168997_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [CANE]

Project description:The Italian island of Sardinia is well known in studies of human population isolates. It is also home to the Fonni's Dog, a breed of canine whose development was reliant on the functionality of the dog. Using genome-wide variant and sequence analyses, we have characterized the Fonni's Dog relative to 27 other dog breeds from the Mediterranean region. We determine introgression events relevant to Mediterranean breed development and describe how the Fonni's dog presents an intriguing model demonstrating the characteristics of traditional human population isolates and, in particular, exhibiting the unique demographic composition of the people of Sardinia.

2016-06-10 | GSE83225 | GEO

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [MEDI]

2016-06-10 | GSE83154 | GEO

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [COO]

2016-06-10 | GSE83151 | GEO

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [CANE]

2016-06-10 | E-GEOD-83225 | biostudies-arrayexpress

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [MEDI]

2016-06-10 | E-GEOD-83154 | biostudies-arrayexpress

Studies of canine breed development on the island of Sardinia recapitulate genomic features of human population isolates [COO]

2016-06-10 | E-GEOD-83151 | biostudies-arrayexpress

Studies of modern Italian dog populations reveal multiple patterns for domestic breed evolution

Project description:Through thousands of years of breeding and strong human selection, the dog (Canis lupus familiaris) exists today within hundreds of closed populations throughout the world, each with defined phenotypes. A singular geographic region with broad diversity in dog breeds presents an interesting opportunity to observe potential mechanisms of breed formation. Italy claims 14 internationally recognized dog breeds, with numerous additional local varieties. To determine the relationship among Italian dog populations, we integrated genetic data from 263 dogs representing 23 closed dog populations from Italy, seven Apennine gray wolves. Using 142,840 genome-wide SNPs, this dataset was used in the identification of breed development routes for the Italian breeds that included divergence from common populations for a specific purpose, admixture of regional stock with that from other regions, and isolated selection of local stock with specific attributes.

2018-10-10 | GSE121027 | GEO

Identification of gene modulating vascular inflammation using chromosome 2 fragment substitutions and RNA sequencing [miRNA-Seq]

Project description:Chromosome 2 introgression from normotensive Brown Norway (BN) rats into hypertensive Dahl salt-sensitive (SS) background (consomic S2B) reduced blood pressure (BP) and vascular inflammation under normal salt diet (NSD). We hypothesized that BN chromosome 2 contains anti-inflammatory genes that could reduce BP elevation and vascular inflammation in rats fed NSD and high salt diet (HSD). We used chromosome 2 fragment substitutions to map chromosome 2 portion associated with vascular inflammation changes and next generation sequencing (NGS) to profile microRNAs in thoracic descending aorta of SS and congenic rats fed NSD or HSD.

2021-03-22 | GSE149515 | GEO

Fennoscandian wolves

Project description:Whole-genome analyses provide no evidence for dog introgression in Fennoscandian wolf populations

| PRJEB39198 | ENA

Project description:Adaptive introgression in Arabidopsis lyrata

| PRJEB20573 | ENA