Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Triticum aestivum cultivar:Jimai5265

ABSTRACT: Triticum aestivum cultivar:Jimai5265 Transcriptome or Gene expression

PROVIDER: PRJNA362497 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5186382_1.fastq.gz	Fastqsanger.gz
	SRR5186382_2.fastq.gz	Fastqsanger.gz
	SRR5186313_1.fastq.gz	Fastqsanger.gz
	SRR5186313_2.fastq.gz	Fastqsanger.gz
	SRR5186364_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

The TriMet_DB: a manually curated database of the metabolic proteins of Triticum aestivum

Project description:Mass spectrometry-based wheat proteomics is challenging because the current interpretation of mass spectrometry data relies on public databases that are not exhaustive (UniProtKB/Swiss-Prot) or contain many redundant and poor or un-annotated entries (UniProtKB/TrEMBL). Here we report the development of a manually curated database of the metabolic proteins of Triticum aestivum (hexaploid wheat), named TriMet_DB (Triticum aestivum Metabolic Proteins DataBase). The manually curated TriMet_DB was generated in FASTA format, so that it can be read directly by programs used to interpret the mass spectrometry data. Furthermore, the complete list of entries included in the TriMet_DB is reported in a freely available resource, which includes for each protein the description, the gene code, the protein family,and the allergen name (if any). To evaluate its performance, the TriMet_DB was used to interpret the mass spectrometry data acquired on the metabolic protein fraction extracted from the MEC cultivar of Triticum aestivum.

2023-03-11 | PXD037709 | Pride

Triticum aestivum cultivar:Bainong207

Project description:Triticum aestivum cultivar:Bainong207 Transcriptome or Gene expression

| PRJNA907253 | ENA

Triticum aestivum strain:cultivar

Project description:Triticum aestivum strain:cultivar Transcriptome or Gene expression

| PRJNA217717 | ENA

Triticum aestivum cultivar:Svilena

Project description:Triticum aestivum cultivar:Svilena Transcriptome or Gene expression

| PRJNA297977 | ENA

Triticum aestivum cultivar:Cellule

Project description:Triticum aestivum cultivar:Cellule Transcriptome or Gene expression

| PRJNA808851 | ENA

Triticum aestivum cultivar:Bainong207

Project description:Triticum aestivum cultivar:Bainong207 Transcriptome or Gene expression

| PRJNA907250 | ENA

Triticum aestivum cultivar:kharchia

Project description:Triticum aestivum cultivar:kharchia Transcriptome or Gene expression

| PRJNA340342 | ENA

Triticum aestivum cultivar:Luyuan502

Project description:Triticum aestivum cultivar:Luyuan502 Transcriptome or Gene expression

| PRJNA380841 | ENA

Triticum aestivum cultivar:cang6005

Project description:Triticum aestivum cultivar:cang6005 Transcriptome or Gene expression

| PRJNA604299 | ENA

Triticum aestivum cultivar:Thatcher

Project description:Triticum aestivum cultivar:Thatcher Transcriptome or Gene expression

| PRJNA271905 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data