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Ferroglobus placidus

ABSTRACT: Ferroglobus placidus overview

PROVIDER: PRJNA37189 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
	SRR019236.fastq.gz	Fastqsanger.gz
	SRR019237.fastq.gz	Fastqsanger.gz
	SRR019238.fastq.gz	Fastqsanger.gz
	SRR071436.fastq.gz	Fastqsanger.gz

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Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus

Project description:This SuperSeries is composed of the following subset Series: GSE28549: Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Phenol vs. Benzoate) GSE30798: Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Benzene vs. Acetate) GSE30799: Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Benzene vs. Phenol) GSE30801: Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus (Benzene vs. Benzoate) Refer to individual Series

2011-07-19 | E-GEOD-30796 | biostudies-arrayexpress

Expression analysis of phenol degradation in the hyperthermophilic archaeon Ferroglobus placidus

2011-01-05 | GSE26423 | GEO

Expression analysis of phenol degradation in the hyperthermophilic archaeon Ferroglobus placidus

Project description:Investigation of whole genome gene expression level changes in Ferroglobus placidus grown on phenol versus acetate as electron donors, with ferric citrate as electron acceptor. A six chip study using total RNA recovered from three separate cultures of Ferroglobus placidus DSM 10642 grown with 0.5 mM phenol and three separate cultures of Ferroglobus placidus DSM 10642 grown on 10 mM acetate. Each chip measures the expression level of 2613 genes from Ferroglobus placidus DSM 10642 with nine 45-60-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

2011-01-05 | E-GEOD-26423 | biostudies-arrayexpress

Anaerobic Degradation of Phenylacetate By the Hyperthermophilic Archaeon, Ferroglobus placidus

Project description:Comparison of acetate- to phenylacetate-grown F. placidus cells to identify genes that are potentially involved in anaerobic phenylacetate degradation by this unique hypertherophilic archaeon. A four chip study using total RNA recovered from two separate cultures of Ferroglobus placidus DSM 10642 grown with 1 mM phenylacetate (experimental condition) and two separate cultures of Ferroglobus placidus DSM 10642 grown on 10 mM acetate (control condition). Each chip measures the expression level of 2613 genes from Ferroglobus placidus DSM 10642 with nine 45-60-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

2014-10-01 | E-GEOD-59466 | biostudies-arrayexpress

Anaerobic Degradation of Butyrate By the Hyperthermophilic Archaeon, Ferroglobus placidus

Project description:Comparison of acetate- to butyrate-grown F. placidus cells to identify genes that are potentially involved in fatty acid degradation by this unique hypertherophilic archaeon. A four chip study using total RNA recovered from three separate cultures of Ferroglobus placidus DSM 10642 grown with 1 mM butyrate (experimental condition) and three separate cultures of Ferroglobus placidus DSM 10642 grown on 10 mM acetate (control condition). Each chip measures the expression level of 2613 genes from Ferroglobus placidus DSM 10642 with nine 45-60-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

2014-10-01 | E-GEOD-59465 | biostudies-arrayexpress

Ferroglobus placidus

Project description:Anaerobic Degradation of Phenylacetate By the Hyperthermophilic Archaeon, Ferroglobus placidus

| PRJNA255390 | ENA

Ferroglobus placidus

Project description:Anaerobic Degradation of Butyrate By the Hyperthermophilic Archaeon, Ferroglobus placidus

| PRJNA255391 | ENA

Expression analysis of benzoate and phenol degradation in the hyperthermophilic archaeon Ferroglobus placidus

Project description:This SuperSeries is composed of the following subset Series: GSE26421: Expression analysis of benzoate degradation in the hyperthermophilic archaeon Ferroglobus placidus GSE26423: Expression analysis of phenol degradation in the hyperthermophilic archaeon Ferroglobus placidus Refer to individual Series

2011-01-05 | E-GEOD-26424 | biostudies-arrayexpress

Ferroglobus placidus

Project description:Cytochromes Associated with Fe(III) Oxide Reduction in the Hyperthermophilic Archaeon Ferroglobus placidus

| PRJNA255389 | ENA

Cytochromes Associated with Fe(III) Oxide Reduction in the Hyperthermophilic Archaeon Ferroglobus placidus

Project description:Differential expression of electron transfer genes during growth with insoluble iron provided as an electron acceptor compared to soluble iron. A four chip study using total RNA recovered from two separate cultures of Ferroglobus placidus DSM 10642 grown with 10 mM acetate provided as electron donor and insoluble iron hydroxide provided as electron acceptor (experimental condition) and two separate cultures of Ferroglobus placidus DSM 10642 grown on 10 mM acetate with soluble iron citrate provided as electron acceptor (control condition). Each chip measures the expression level of 2613 genes from Ferroglobus placidus DSM 10642 with nine 45-60-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

2014-10-01 | E-GEOD-59467 | biostudies-arrayexpress

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