Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA sequencing analysis of cardiomyocytes

ABSTRACT: RNA sequencing analysis of cardiomyocytes

PROVIDER: PRJNA380273 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5375250.fastq.gz	Fastqsanger.gz
	SRR5375260.fastq.gz	Fastqsanger.gz
	SRR5375270.fastq.gz	Fastqsanger.gz
	SRR5375251.fastq.gz	Fastqsanger.gz
	SRR5375261.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 33

Similar Datasets

RNA Sequencing of Human iPS derived Cardiomyocytes

Project description:RNA Sequencing of Human iPS derived Cardiomyocytes

| PRJNA454451 | ENA

RNA sequencing analysis for differentially expressed genes in neonatal rat cardiomyocytes following knockdown of transcription factor Vezf1

Project description:We performed a set of sequencing experiments to identify the targets of Vascular endothelial zinc finger 1 (Vezf1) in neonatal rat cardiomyocytes. We compared a set of control samples to samples transfected with Vezf1 siRNA by high throughput sequencing. Vascular endothelial zinc finger 1 (Vezf1) siRNA was transfected into the neonatal rat ventricular cardiomyocytes for 24h and thereafter the cells were incubated in serum free medium for 48h.

2019-11-30 | E-MTAB-7124 | biostudies-arrayexpress

Gene expression analysis comparing rat neonatal cardiomyocytes and human iPSC-cardiomyocytes

Project description:Bulk RNA sequencing of rat neonatal cardiomyocytes and hiPSC-cardiomyocytes treated with vehicle or GPCR agonists for 60 minutes.

2023-06-26 | GSE225707 | GEO

RNA-seq analysis of mouse cardiomyocytes treated with dnMKL1

Project description:RNA-seq analysis of mouse cardiomyocytes treated with dnMKL1

| PRJNA561181 | ENA

RNA-seq analysis of Actn2 knockout in mouse cardiomyocytes

Project description:RNA-seq analysis of Actn2 knockout in mouse cardiomyocytes

| PRJNA561180 | ENA

RNA Sequencing of cardiomyocytes from different treatment conditions

Project description:RNA Sequencing of cardiomyocytes from different treatment conditions

| PRJNA687243 | ENA

Analysis of transcrptomes of Danon patient derived hiPSC-cardiomyocytes by RNA-deep Sequencing

Project description:Analysis of transcrptomes of Danon patient derived hiPSC-cardiomyocytes by RNA-deep Sequencing

| PRJNA427270 | ENA

Small RNA sequencing in mouse cardiomyocytes after siRNA mediated knockdown of Srf

Project description:We performed two independent siRNA mediated knockdowns of Srf (Srf si1 & Srf si2) and an unspecific siRNA (siNon) in mouse cardiomyocytes HL-1 cells. Small RNAs were sequenced by Illumina/Solexa next-generation (single-end) sequencing technology. The sequence reads were mapped to the mouse reference genome (NCBI v37, mm9) using MicroRazerS. MicroRazerS searches for the longest possible prefix-match of each read, i.e. the longest possible contiguous match starting at the first base. Hence, it is robust to possible adapter sequence at the 3' end of a read and requires no adapter trimming. Small RNA-seq profiles of two siRNA mediated knockdowns of Srf and an unspecific siRNA in mouse cardiomyocytes

2011-01-03 | E-GEOD-19066 | biostudies-arrayexpress

scRNASeq analysis of cycling cardiomyocytes

Project description:scRNASeq analysis of cycling cardiomyocytes

| PRJNA575248 | ENA

Bulk-RNA-sequencing from chamber specific heart tissue and isolated cardiomyocytes

Project description:Healthy hearts from warm cadavers not usable for heart transplants were identified and tissues were isolated from these. From ventricle tissues, cardiomyocytes were further isolated. Bulk-RNA-sequencing was performed.

2023-04-24 | GSE204885 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data