Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Halomonas alkalicola strain:CICC 11012S

ABSTRACT: Halomonas alkalicola Genome sequencing and assembly

PROVIDER: PRJNA380492 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR25592768_1.fastq.gz	Fastqsanger.gz
	SRR25592768_2.fastq.gz	Fastqsanger.gz
	SRR25592769_1.fastq.gz	Fastqsanger.gz
	SRR25592769_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Halomonas alkalicola

Project description:Halomonas alkalicola overview

| PRJNA633931 | ENA

Halomonas alkalicola strain:M2

Project description:Halomonas alkalicola strain:M2 Genome sequencing

| PRJNA991745 | ENA

Halomonas alkalicola

Project description:Halomonas alkalicola Raw sequence reads

| PRJNA633726 | ENA

Bacillus alkalicola strain:JCM 17098

Project description:Bacillus alkalicola strain:JCM 17098 Genome sequencing and assembly

| PRJNA739829 | ENA

Baseline Proteomics Characterisation of Biomanufacturing Organism Halomonas Bluephagenesis

Project description:Biomanufacturing remains financially uncompetitive with the lower cost but higher carbon emitting hydrocarbon based chemical industry. Novel chassis organisms may enable cost reductions with respect to traditional chassis such as E. coli and so open an economic rout to low emission biomanufacturing. Extremophile bacteria exemplify that potential. Salt tolerant halomonas species thrive in conditions inimical to other organisms. Their adoption would eliminate the cost of sterilising equipment. Novel chassis are inevitably poorly understood in comparison to established organisms. Rapid characterisation and community data sharing will facilitate organisms’ adoption for biomanufacturing. This paper describes baseline proteomics data set for Halomonas bluephagenesis TD01 under active development for biomanufactoring. The data record comprises a newly sequenced genome for the organism; evidence for expression of 1150 proteins (30% of the proteome) including baseline quantification of 1050 proteins (27% of the proteome) and a spectral library enabling re-use for targeted proteomics assays. Protein data is annotated with KEGG Orthology enabling rapid matching of quantitative data to pathways of interest to biomanufacturing.

2022-07-11 | PXD030494 | Pride

Halomonas sp.

Project description:Halomonas Genome sequencing and assembly

| PRJNA360432 | ENA

Halomonas dongshanensis

Project description:Halomonas dongshanensis Genome sequencing and assembly

| PRJNA776670 | ENA

Halomonas sp.

Project description:Halomonas sp. Genome sequencing and assembly

| PRJNA343499 | ENA

Halomonas campaniensis

Project description:Halomonas campaniensis Genome sequencing and assembly