Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Medicago truncatula strain:A17

ABSTRACT: Genome-wide Analysis of Small Signaling Peptides in Medicago truncatula with an Emphasis on Macro-nutrient Regulation of Root and Nodule Development

PROVIDER: PRJNA388818 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5721220_1.fastq.gz	Fastqsanger.gz
	SRR5721220_2.fastq.gz	Fastqsanger.gz
	SRR5721230_1.fastq.gz	Fastqsanger.gz
	SRR5721230_2.fastq.gz	Fastqsanger.gz
	SRR5721240_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 144

Similar Datasets

Expression data of Medicago truncatula Jemalong A17 roots treated with auxin transport inhibitors

Project description:Rhizobium and allied bacteria form symbiotic nitrogen-fixing nodules on legume roots. Plant hormones appear to play a role in nodule formation. We treated Medicago truncatula roots with auxin transport inhibitors (ATIs) N-(1-naphthyl)phthalamic acid (NPA) and 2,3,5-triiodobenzoic acid (TIBA) to induce the formation of pseudonodules. We compared the transcriptional responses of M. truncatula roots treated with ATIs to roots inoculated with Sinorhizobium meliloti. The transcriptional response of M. truncatula roots 1 and 7 days after ATI treatment were opposite to roots treated with S. meliloti.

2011-03-26 | GSE27991 | GEO

Medicago truncatula strain:A17

Project description:Comparative transcriptomics in Medicago truncatula nodule development

| PRJNA391316 | ENA

Cell- and tissue-specific transcriptome analyses of Medicago truncatula root nodules

Project description:We used laser-capture microdissection (LCM) to isolate specific cells from the Medicago truncatula nodule meristem (M), the distal infection (DIZ), the proximal infection zone (PIZ), infected cells (IC) and uninfected cells (UIC) from the fixation zone. Based on Medicago GeneChips, we identified the cell- and tissue-specific programm of gene expression in Medicago truncatula root nodules.

2013-05-29 | GSE43354 | GEO

Expression data of Medicago truncatula Jemalong A17 roots treated with S. meliloti exoA mutant or auxin transport inhibitors

2011-03-26 | GSE28171 | GEO

Expression data of Medicago truncatula Jemalong A17 roots treated with auxin transport inhibitors

2011-03-26 | E-GEOD-27991 | biostudies-arrayexpress

Transcript analysis of aluminum tolerance responses in Medicago truncatula (A17)

Project description:For transcript analysis of aluminum tolerance responses in Medicago truncatula (A17) we compared transcripts from 2.5 µM Al-treated and control (-Al) root tips corresponding to 12 h after Al treatment. Keywords: One time point and one genotype

2007-02-22 | GSE7066 | GEO

Medicago truncatula strain:A17

Project description:Medicago truncatula RNAseq

| PRJNA391314 | ENA

Transcription profiling of all major organ systems of Medicago truncatula to create a gene expression atlas

Project description:Medicago truncatula, which has a relatively small diploid genome, has been adopted as a model species for legume genomics. To enhance its value as a model, we have generated a gene expression atlas that provides a global view of gene expression in all major organ systems of this species, with special emphasis on nodule and seed development.

2008-03-15 | E-MEXP-1097 | biostudies-arrayexpress

Medicago truncatula cultivar:A17

Project description:Medicago truncatula hormone treated roots

| PRJNA490370 | ENA

Expression data of Medicago truncatula Jemalong A17 roots treated with S. meliloti exoA mutant or auxin transport inhibitors

2011-03-25 | E-GEOD-28171 | biostudies-arrayexpress