Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Groundwater metagenome

ABSTRACT: subsurface groundwater metagenome Metagenome

PROVIDER: PRJNA389342 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8867079.fastq.gz	Fastqsanger.gz
	SRR8867079_1.fastq.gz	Fastqsanger.gz
	SRR8867079_2.fastq.gz	Fastqsanger.gz
	DUDS01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

Groundwater Metagenome

Project description:Deep Subsurface Groundwater Metagenome

| PRJNA471718 | ENA

groundwater metagenome

Project description:Rifle CO Subsurface Groundwater Metagenome

| PRJNA114691 | ENA

Groundwater metabolome responds to recharge in fractured sedimentary strata

Project description:<p>Understanding biogeochemical conversions of dissolved organic matter (DOM) in aquifers is paramount for the effective management of groundwater supplies. On its passage through the critical zone, DOM is subject to biogeochemical conversions and therefore carries cross-habitat information useful for monitoring and predicting the stability of groundwater ecosystem services. Groundwater metabolomics assesses this information. However, challenges arise from insufficient knowledge on groundwater metabolite composition and dynamics, and the necessity to maintain analytical conditions for long-term monitoring. We explored fractured sedimentary bedrock by 5-year untargeted metabolomics monitoring for oxic perched and anoxic phreatic sites along a hillslope recharge area, to evaluate DOM as groundwater tracer. Dimension reduction by principal component analysis revealed that metabolome dissimilarities between distant wells coincide with transient cross-stratal flow indicated by groundwater levels and environmental tracers. The metabolome was highly variable lacking seasonal patterns, and did not segregate by geographic location of sampling wells thus ruling out surface vegetation or (agricultura) land use as driving factor. The metabolome time series provide detailed insights into subsurface responses to recharge dynamics. Metabolomics monitoring provides information on groundwater flows, and allows concluding about below ground ecology and water quality evolution, required to understand the impact of interannual wet-dry cycles.</p>

2022-03-21 | MTBLS3450 | MetaboLights

groundwater metagenome

Project description:Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR46_M_MetaG metagenome

| PRJNA404457 | ENA

groundwater metagenome

Project description:Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR13_S1_MetaG metagenome

| PRJNA404455 | ENA

groundwater metagenome

Project description:Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR13_S2_MetaG metagenome

| PRJNA404456 | ENA

groundwater metagenome

Project description:Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_S1_MetaG metagenome

| PRJNA404452 | ENA

groundwater metagenome

Project description:Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_S2_MetaG metagenome

| PRJNA404453 | ENA

groundwater metagenome

Project description:Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR13_J_MetaG metagenome

| PRJNA404454 | ENA

groundwater metagenome

Project description:Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR46_S_MetaG metagenome

| PRJNA404458 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data