Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mumps orthorubulavirus

ABSTRACT: Mumps orthorubulavirus Genome sequencing

PROVIDER: PRJNA394142 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11741300_1.fastq.gz	Fastqsanger.gz
	SRR11741300_2.fastq.gz	Fastqsanger.gz
	SRR11741400_1.fastq.gz	Fastqsanger.gz
	SRR11741400_2.fastq.gz	Fastqsanger.gz
	SRR11741301_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 482

Similar Datasets

Mumps orthorubulavirus

Project description:Mumps virus overview

| PRJNA73799 | ENA

Mumps orthorubulavirus

Project description:Mumps Virus Sequencing - Infectious Clone Studies

| PRJNA883737 | ENA

Mumps orthorubulavirus

Project description:Sequencing of Vaccine Preventable Disease Agents - Mumps

| PRJNA73019 | ENA

Mumps orthorubulavirus isolate:20170608_BC01

Project description:Mumps rubulavirus Genomes from 2016 Arkansas Outbreak

| PRJNA517140 | ENA

Transposon mutagenesis screening of Sendai virus and mumps virus

Project description:We report the genetic plasticity of Sendai virus and mumps virus. We introduced insertional mutation in the virus genome and checked fitness by comparing distribution of mutans in passage 1 and passage 2.

2019-02-01 | GSE125257 | GEO

growth competition assay of Sendai virus and mumps virus

Project description:We evaluate the individual growth of 8 mutants of Sendai virus in the competitive condition under the cultured cells. We also evalate the growth of 6 mutants of mumps virus in the similar competitive condition.

2019-03-21 | GSE128625 | GEO

Structural and molecular properties of inclusion bodies of mumps virus

Project description:Viral RNA synthesis of mononegaviruses occurs in the cytoplasmic membrane-less organelles called as inclusion body (IB). Here, we reported that the IBs of mumps virus (MuV), which is the causative agent of mumps and belongs to the family Paramyxoviridae, had properties of liquid organelles formed by liquid-liquid phase separation. Super-resolution microscopic analysis of the MuV IBs demonstrated that nucleocapsid and phospho-(P) proteins formed the cage-like structure and that viral polymerase was in a reticular pattern and partially co-localized with viral mRNA. In addition, we characterized host RNAs localized in the MuV IBs by a spatial transcriptome analysis and found that G-quadruplex motif sequences containing RNAs (G4-RNAs) were concentrated. In vitro phase separation assay showed that the G4-RNAs interacted with the P protein and enhanced condensation in the P droplets. Taken together, our data show that MuV generates the IBs with a characteristic cage-like structure and host G4-RNAs play an important role in the formation of MuV IBs

2024-10-31 | GSE268004 | GEO

Vaccine measles, mumps, rubella, chickenpox

Project description:Vaccine measles, mumps, rubella, chickenpox Metagenome

| PRJNA493815 | ENA

Search for host factors located in the vicinity of the cytoplasmic tails of the mumps virus glycoproteins

Project description:Mumps virus (MuV) is the etiological agent of mumps, a disease characterized by painful swelling of the parotid glands and often accompanied by severe complications. To understand the molecular mechanism of MuV infection, a functional analysis of the involved host factors is required. However, little is known about the host factors involved in MuV infection, especially those involved in the late stage of infection. In this project, we introduced the N-terminal and C-terminal fragments of split-TurboID into the cytoplasmic domains of hemagglutinin-neuraminidase and fusion proteins, respectively, and confirmed reconstitution and functional ligase activity of split-TurboID. Following affinity purification and mass spectrometry, 641 proteins were identified as being significantly enriched in the split-TurboID-expressing cells.

2022-10-29 | PXD035151 | Pride

Mumps virus (MuV)

Project description:Recombinant Mumps viruses grown on Vero cells (Cercopithecus aethiops). Detection and quantification of defective viral genomes (DVGs) in high throughput sequencing data using DVG-profiler, a novel post sequence alignment processing algorithm.

| PRJNA525871 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data