Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bos taurus strain:Droughtmaster Cattle

ABSTRACT: Bos taurus strain:Droughtmaster Cattle Raw sequence reads

PROVIDER: PRJNA394783 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5856498_1.fastq.gz	Fastqsanger.gz
	SRR5856498_2.fastq.gz	Fastqsanger.gz
	SRR5856499_1.fastq.gz	Fastqsanger.gz
	SRR5856499_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Bos taurus breed:cattle

Project description:Bos taurus breed:cattle Raw sequence reads

| PRJNA846867 | ENA

Bos taurus breed:cattle

Project description:Bos taurus breed:cattle Raw sequence reads

| PRJNA846691 | ENA

Bos taurus breed:Holstein cattle

Project description:Bos taurus breed:Holstein cattle Raw sequence reads

| PRJNA1077771 | ENA

Bos taurus breed:Holstein cattle

Project description:Bos taurus breed:Holstein cattle Raw sequence reads

| PRJNA313332 | ENA

Bos taurus breed:Hybrid taurine cattle

Project description:Bos taurus breed:Hybrid taurine cattle Raw sequence reads

| PRJNA550239 | ENA

Transcriptome profiling and Co-expression networks of longissimus dorsi muscle in Gayal（Bos frontalis）and Banna cattle（Bos taurus） with different beef qualities

Project description:The Gayal (Bos frontalis) is a rare semi-domesticated cattle in China. Gayal has typical beef body shape and good meat production performance. Compared with other cattle species, it has the characteristics of tender meat and extremely low fat content. To explore the underlying mechanism responsible for the differences of meat quality between different breeds, the longissimus dorsi muscle (LM) from Gayal and Banna cattle (Bos taurus) were investigated using transcriptome analysis. The gene expression profiling identified 638 differentially expressed genes (DEGs) between LM muscles from Gayal and Banna cattle. Gene Ontology (GO) enrichment of biological functions and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis showed that the gene products were mainly involved in the PPAR signaling pathway, lipid metabolism and amino acid metabolism pathway. Protein-protein interaction（PPI） network analysis showed APOB, CYP7A1, THBS2, ITGAV, IGFBP1 and IGF2R may have great impact on meat quality characteristics of Gayal. Moreover, three transcription factors, FOXA2, NEUROG2, and RUNX1, which may affect meat quality by regulating the expression of genes related to muscle growth and development have also been found. In summary, our research reveals the molecular mechanisms that cause Gayal meat quality characteristics. It will contribute to improving meat quality of cattle through molecular breeding.

2024-09-01 | GSE164462 | GEO

Bos taurus strain:Chinese cattle | breed:Qinchuan

Project description:Hi-C of Bos taurus (cattle) muscle Raw sequence reads

| PRJNA635966 | ENA

Bos taurus breed:dairy cattle | cultivar:Holstein

Project description:Bos taurus breed:dairy cattle | cultivar:Holstein Raw sequence reads

| PRJNA418611 | ENA

Bos taurus

Project description:Bos taurus Raw sequence reads

| PRJNA428590 | ENA

Bos taurus

Project description:Bos taurus Raw sequence reads