Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: CO1 gene sequences of fresh water organisms of lake SKaban

PROVIDER: PRJNA394961 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5839796_1.fastq.gz	Fastqsanger.gz
	SRR5839796_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:CO1 gene sequences of fresh water organisms

| PRJNA394612 | ENA

Project description:COI gene sequences of fresh water organisms of SKaban lake

| PRJNA395000 | ENA

Project description:COI gene sequences of fresh water organisms

| PRJNA394955 | ENA

Project description:COI gene sequencing of fresh water organisms of lake Nkaban

| PRJNA394963 | ENA

lake water metagenome and assembled organisms

Project description:lake water metagenome and assembled organisms

| PRJNA648758 | ENA

Project description:COI gene sequences of fresh water oraganisms of VKaban lake2017

| PRJNA394999 | ENA

Regional Epigenetic Variation in Asexual Snail Populations among Urban and Rural Lakes

Project description:Epigenetic variation has the potential to control environmentally dependent development and contribute to phenotypic responses to local environments. Environmental epigenetic studies of sexual organisms confirm the responsiveness of epigenetic variation, which should be even more important when genetic variation is lacking. A previous study of an asexual snail, Potamopyrgus antipodarum, demonstrated that different populations derived from a single clonal lineage differed in both shell phenotype and methylation signature when comparing lake versus river populations. Here, we examine methylation variation among lakes that differ in environmental disturbance and pollution histories. The differential DNA methylation regions (DMRs) identified among the different lake comparisons suggested a higher number of DMRs and variation between rural Lake 1 and one urban Lake 2 and between the two urban Lakes 2 and 3, but limited variation between the rural Lake 1 and urban Lake 3. DMR genomic characteristics and gene associations were investigated. Observations suggest there is no effect of geographic distance or any consistent pattern of DMRs between urban and rural lakes. Environmental factors may influence epigenetic response.

2019-09-27 | GSE133502 | GEO

Project description:Circular DNA viral metagenomics of fresh water lake

| PRJNA702105 | ENA

Project description:Lake Elsinore 2016 water 16S sequences

| PRJNA681629 | ENA

microRNAome of fresh maize

Project description:To evaluate the miRNA characteristic in fresh maize, we used small RNA-seq to get microRNAome of fresh maize.In this study, we identified 236 miRNAs sequences, of which 19 miRNAs are aboundantly expressed in fresh maize (normalized reads> 1000 ).

2017-06-13 | GSE87451 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data