Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Parthenium argentatum

ABSTRACT: Parthenium argentatum Raw sequence reads

PROVIDER: PRJNA400611 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR5989650.fastq.gz	Fastqsanger.gz
	SRR5989643.fastq.gz	Fastqsanger.gz
	SRR5989644.fastq.gz	Fastqsanger.gz
	SRR5989645.fastq.gz	Fastqsanger.gz
	SRR5989646.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Parthenium argentatum

Project description:Parthenium argentatum Raw sequence reads

| PRJNA289254 | ENA

Parthenium argentatum

Project description:Parthenium argentatum overview

| PRJNA289548 | ENA

Parthenium argentatum strain:W6 429

Project description:Parthenium argentatum strain:W6 429 Raw sequence reads

| PRJNA369535 | ENA

Parthenium argentatum cultivar:AZ-2

Project description:Transcriptome analysis of rubber biosynthesis in guayule (Parthenium argentatum Gray)

| PRJNA387289 | ENA

Tanacetum parthenium

Project description:Tanacetum parthenium Raw sequence reads

| PRJNA1159122 | ENA

Tanacetum parthenium

Project description:Tanacetum parthenium Raw sequence reads

| PRJNA1159145 | ENA

Tanacetum parthenium

Project description:Tanacetum parthenium Raw sequence reads

| PRJNA1128347 | ENA

Tanacetum parthenium

Project description:Tanacetum parthenium overview

| PRJNA1125974 | ENA

Transcriptome analysis of rubber biosynthesis in guayule (Parthenium argentatum gray).

Project description:BACKGROUND:Natural rubber is currently produced nearly exclusively from latex of the Para rubber tree, Hevea brasiliensis. The desire to reduce the environmental cost of rubber production, fears of pathogen susceptibility in clonal Hevea plantations, volatility in the price of natural rubber, and increasing labor costs have motivated efforts to diversify the supply of natural rubber by developing alternative rubber crops such as guayule (Parthenium argentatum Gray). In Hevea, latex is produced as an exudate following wounding while in guayule, rubber is deposited within the cortical parenchyma and its production is strongly influenced by environmental conditions. RESULTS:To better understand the enzymology and regulation of guayule rubber biosynthesis and to identify genes with potential uses in the improvement of rubber yields, we conducted de novo transcriptome assembly and differential gene expression analyses of this process in guayule. This analysis supports a role for rubber in the defense against pathogens, identified new enzymes potentially involved in the biosynthesis of rubber as well as transcription factors specifically expressed in rubber-producing tissues. CONCLUSIONS:Data presented here will be useful in the improvement of guayule as an alternative source of natural rubber and in better understanding the biosynthesis of this critical polymer. In particular, some of the candidate transcription factors are likely to control the rubber biosynthesis pathway and are good targets for molecular breeding or engineering of guayule plants with higher and more consistent production of rubber.

| S-EPMC6373111 | biostudies-literature