Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cystostereum murrayi strain:CysMur001

ABSTRACT: Cystostereum murraii CysMur001 Transcriptome

PROVIDER: PRJNA403332 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6049589_1.fastq.gz	Fastqsanger.gz
	SRR6049589_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Cystostereum murrayi

Project description:Cystostereum murrayi overview

| PRJNA347400 | ENA

Cystostereum murrayi strain:CysMur001

Project description:Cystostereum murraii CysMur001 Transcriptome

| PRJNA402916 | ENA

Cystostereum murrayi strain:CysMur001

Project description:Cystostereum murraii CysMur001 Standard Draft genome sequencing

| PRJNA334678 | ENA

Cystostereum murrayi strain:FP-101307-Sp

Project description:Cystostereum murrayi FP-101307-Sp genome sequencing

| PRJNA346787 | ENA

Plectus murrayi

Project description:Plectus murrayi Transcriptome or Gene expression

| PRJNA437987 | ENA

A Draft Mitogenome of <i>Plectus Murrayi</i>.

Project description:Plectus murrayi is a free-living microbivorous nematode endemic to Antarctic soils. Our draft assembly of its mitogenome was 15,656 bp long, containing 12 protein-coding, eight transfer RNA (tRNA), and two ribosomal RNA (rRNA) genes. Mitophylogenomic analyses extend our understanding of mitochondrial evolution in Nematoda.

| S-EPMC9583411 | biostudies-literature

Genome analysis of Plectus murrayi, a nematode from continental Antarctica.

Project description:Plectus murrayi is one of the most common and locally abundant invertebrates of continental Antarctic ecosystems. Because it is readily cultured on artificial medium in the laboratory and highly tolerant to an extremely harsh environment, P. murrayi is emerging as a model organism for understanding the evolutionary origin and maintenance of adaptive responses to multiple environmental stressors, including freezing and desiccation. The de novo assembled genome of P. murrayi contains 225.741 million base pairs and a total of 14,689 predicted genes. Compared to Caenorhabditis elegans, the architectural components of P. murrayi are characterized by a lower number of protein-coding genes, fewer transposable elements, but more exons, than closely related taxa from less harsh environments. We compared the transcriptomes of lab-reared P. murrayi with wild-caught P. murrayi and found genes involved in growth and cellular processing were up-regulated in lab-cultured P. murrayi, while a few genes associated with cellular metabolism and freeze tolerance were expressed at relatively lower levels. Preliminary comparative genomic and transcriptomic analyses suggest that the observed constraints on P. murrayi genome architecture and functional gene expression, including genome decay and intron retention, may be an adaptive response to persisting in a biotically simplified, yet consistently physically harsh environment.

| S-EPMC8022722 | biostudies-literature

Plectus murrayi

Project description:Plectus murrayi Genome sequencing and assembly

| PRJNA317772 | ENA

Plectus murrayi

Project description:Plectus murrayi overview

| PRJNA438008 | ENA

Deinococcus murrayi

Project description:Deinococcus murrayi overview

| PRJNA189104 | ENA