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Danio rerio

ABSTRACT: Sequencing of Danio rerio embryo from wildtype and microRNA treated animals

PROVIDER: PRJNA407087 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6032100.fastq.gz	Fastqsanger.gz
	SRR6032091.fastq.gz	Fastqsanger.gz
	SRR6032101.fastq.gz	Fastqsanger.gz
	SRR6032092.fastq.gz	Fastqsanger.gz
	SRR6032102.fastq.gz	Fastqsanger.gz

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Danio rerio

Project description:Sequencing of Danio rerio brain from wildtype and Tg-microRNA-sponge animals

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Sequencing of Danio rerio brain from wildtype and Tg-microRNA-sponge animals

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Sequencing of Danio rerio embryo from wildtype and microRNA treated animals

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2021-10-19 | GSE103801 | GEO

Sequencing of Danio rerio liver for 2 age groups

Project description:Comparison of Danio rerio liver for 2 age groups treated with Rotenone. The RNA-seq data comprisess two age groups treated with Rotenone. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

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Sequencing of Danio rerio skin for 2 age groups

Project description:Comparison of Danio rerio skin for 2 age groups treated with Rotenone. The RNA-seq data comprises two age groups treated with different Rotenone dose levels. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

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Danio rerio: wilde-type control vs. tbx5 morpholino

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Sequencing of Danio rerio brain for 2 age groups after Rotenone treatment

Project description:Comparison of Danio rerio brain for 2 age groups treated with Rotenone. The RNA-seq data comprises two age groups treated with different Rotenone dose levels. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

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Mechanism suppressing transcription of the globin genes in Danio rerio nonerythroid cells

Project description:In genomes of modern fish and amphibia α- and β- globin genes are grouped at a single locus that may resemble the ancestral one and is syntenic to α-globin locus of modern warm-blooded vertebrates. In Danio rerio, the major locus of α/β globin genes comprises two subclusters, one of them harboring genes expressed in adult and the other – genes expressed in embryonic and larval erythrocytes. The results of our previous study suggested that the adult subcluster of this locus has evolved into α-globin gene domain of vertebrate animals. Here we studied how adult and embryo-larval genes of Danio rerio major globin gene locus are repressed in fibroblasts. The results obtained suggest that that at least some of the globin genes present within the adult subcluster are repressed by Polycomb similarly to human α-globin genes. Furthermore, within two α/β gene pairs repression of α-type and β-type genes appears to be mediated by different mechanisms as increasing the level of histone acetylation can activate transcription of only β-type genes.

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Expression analysis of Danio rerio semaphorin6a and plexinA2 morpholino-injected embryos

Project description:Investigation of whole genome gene expression level changes in Danio rerio semaphorin6A and plexinA2 morphant animals, compared to the wild-type strain. The morphants analyzed in this study are further described in Ebert AM, Childs SJ, Hehr C, Cechmanek PB, McFarlane S. 2014. Sema6a and Plxna2 mediate spatially regulated repulsion within the developing eye to promote eye vesicle cohesion. Development 141(12):2473-2482.

2017-08-28 | GSE86246 | GEO

Danio rerio cultivar:Danio rerio

Project description:Danio rerio cultivar:Danio rerio Transcriptome or Gene expression

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