Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNAseq of T-ALL upon long non coding rna purturbation

ABSTRACT: RNAseq of T-ALL upon long non coding rna purturbation

PROVIDER: PRJNA407957 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6051210.fastq.gz	Fastqsanger.gz
	SRR6051211.fastq.gz	Fastqsanger.gz
	SRR6051212.fastq.gz	Fastqsanger.gz
	SRR6051213.fastq.gz	Fastqsanger.gz
	SRR6051204.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

RNAseq of T-ALL upon long non coding rna purturbation

Project description:T cell leukemia cell lines transciptome changes upon long non coding RNA knockdown by CRISPR and ASO. The target lncRNA is a novel lncRNA called "lnrCXCR4". The sequence of this lncRNA is available at the foot of this page.

2017-09-21 | GSE104018 | GEO

Long non-coding RNA pull down-MS

Project description:long non-coding RNA pull down-MS and protein candidates bind to LRTOR

2024-09-06 | PXD055610 |

Study on expression of long non-coding RNA in colorectal cancer tissues and adjacent tissues

Project description:Interventions: Case series:No Primary outcome(s): long non-coding Ribonucleic Acid Study Design: Sequential

| 2725570 | ecrin-mdr-crc

Long non-coding control of pericyte function

Project description:Long non-coding control of pericyte function

| PRJNA358715 | ENA

Long non-coding RNAs in B cells

Project description:Long non-coding RNAs in B cells

| PRJNA292725 | ENA

Ageing-associated long non-coding RNA extends lifespan and reduces translation in non-dividing cells [aal1_ChIRP-RNAseq]

Project description:Ageing-associated long non-coding RNA extends lifespan and reduces translation in non-dividing cells [aal1_ChIRP-RNAseq]

| PRJNA1016262 | ENA

A microarray analysis of human epidermal keratinocytes upon depletion of the long non-coding RNA LOC100130476

Project description:A microarray analysis of human epidermal keratinocytes upon depletion of the long non-coding RNA LOC100130476

| PRJNA470541 | ENA

Profiling long non-coding RNA expression in oral premalignant lesions.

Project description:Oral epithelial dysplasias are believed to progress through a series of histopathological stages; from mild to severe dysplasia, to carcinoma in situ, and finally to invasive OSCC. Underlying this change in histopathological grade are gross chromosome alterations and changes in gene expression of both protein-coding genes and non-coding RNAs. Recent papers have described associations of aberrant expression of microRNAs, one class of non-coding RNAs, with oral cancer. However, expression profiling of long non-coding RNAs (lncRNAs) has not been reported. Long non-coding RNAs are a novel class of mRNA-like transcripts with no protein coding capacity, but with a variety of functions including roles in epigenetics and gene regulation. In recent reports, the aberrant expression of lncRNAs has been associated with human cancers, suggesting a critical role in tumorigenesis. Here, we present the first long non-coding RNA expression map for the human oral mucosa. We describe the expression of 325 long non-coding RNAs, suggesting lncRNA expression contributes significantly to the oral transcriptome. Intriguingly, 60% of the detected lncRNAs show aberrant expression in oral premalignant lesions. A number of these lncRNAs have been previously associated with other human cancers. A total of six normal oral samples and ten oral premalignant lesions were used to construct SAGE libraries which were then queried for long non-coding RNA expression profiles. The six normal oral samples were previously deposited as GSE8127.

2011-08-14 | E-GEOD-31021 | biostudies-arrayexpress

Long non-coding RNA profiling in 6 cell types

Project description:Long non-coding RNA profiling in 6 cell types

| PRJNA423099 | ENA

Analysis of long non-coding RNAs expression in sarcoma

Project description:Analysis of long non-coding RNAs expression in sarcoma

| PRJNA905533 | ENA