Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Serendipita vermifera ssp. bescii NFPB0129

ABSTRACT: Serendipita vermifera ssp. bescii NFPB0129 Transcriptome

PROVIDER: PRJNA410310 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6232601_1.fastq.gz	Fastqsanger.gz
	SRR6232601_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Serendipita vermifera strain:NFPB0129

Project description:Serendipita vermifera ssp. bescii NFPB0129 - Standard Draft genome sequencing

| PRJNA410309 | ENA

Protein-level regulation of nitrogen and phosphorous metabolism in two endomycorrhizal fungi, Serendipita vermifera and Serendipita bescii

Project description:We sought to characterize the proteome and metabolome of S. vermifera and S. bescii under N and P starvation conditions in vitro. As very little is known about the ecological functioning of the Serendipitaceae in most environments, the overall objective of the study was to elucidate the cellular response(s) of two Serendipitaceae strains toward stress imposed by the lack of one or the other of these important nutrients. Our approach allows us to not only evaluate N and P acquisition processes in the understudied Serendipitaceae, but also to understand the physiological responses to their restriction.

2019-05-20 | PXD010995 | Pride

Serendipita vermifera MAFF 305830

Project description:Serendipita vermifera MAFF 305830 transcriptome

| PRJNA586598 | ENA

RNA-Seq data used to explore transcriptional dynamics in multipartite fungus-plant interactions: Hordeum vulgare, Serendipita vermifera, Bipolaris sorokiniana

Project description:We addressed the question how the interaction between the beneficial root endophyte Serendipita vermifera (Sv) and the pathogen Bipolaris sorokiniana (Bs) affects fungal behavior and determines barley host responses using a gnotobiotic natural soil-based split-root system for phenotypic and transcriptional analyses.

2019-07-06 | GSE130517 | GEO

Serendipita vermifera MAFF 305830

Project description:Serendipita vermifera MAFF 305830 Genome sequencing and assembly

| PRJNA207844 | ENA

Serendipita vermifera

Project description:Sebacina vermifera overview

| PRJNA208094 | ENA

Serendipita vermifera

Project description:Gene expression changes in Sebacina vermifera- Arabidopsis thaliana mycorrhizal roots compared to Sebacina vermifera free-living mycelium

| PRJNA269502 | ENA

Gene expression changes in Sebacina vermifera- Arabidopsis thaliana mycorrhizal roots compared to Sebacina vermifera free-living mycelium

Project description:Illumina HiSeq technology was used to generate mRNA profiles from Sebacina vermifera mycorrhizal roots compared to free-living mycelium . Mycorrhizal roots were harvested after 3, 7 and 14 days, pooled and used for RNA extraction. Reads of 2X100bp were generated and aligned to Sebacina vermifera (http://genome.jgi-psf.org/Sebve1/Sebve1.home.html) using CLC Genomics Workbench 6. mRNA profiles from Sebacina vermifera mycorrhizal roots and free-living mycelium were generated by paired-end (2x100bp) Illumina HiSeq2000 sequencing. Three biological replicates were sequenced for mycorrhizal and mycelium samples.

2015-02-06 | E-GEOD-63923 | biostudies-arrayexpress

Hordeum vulgare, Bipolaris sorokiniana, Serendipita vermifera

Project description:RNA-Seq data used to explore transcriptional dynamics in multipartite fungus-plant interactions : Hordeum vulgare, Serendipita vermifera, Bipolaris sorokiniana + bacterial SynComs

| PRJNA715112 | ENA

Gene expression changes in Sebacina vermifera- Arabidopsis thaliana mycorrhizal roots compared to Sebacina vermifera free-living mycelium

2015-02-06 | GSE63923 | GEO