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Gene expression changes in Cenococcum geophilum 1.58-Populus tremulaxalba INRA 717-1B4 ectomycorrhizal roots compared to Cenococcum geophilum free-living mycelium

ABSTRACT: Gene expression changes in Cenococcum geophilum 1.58-Populus tremulaxalba INRA 717-1B4 ectomycorrhizal roots compared to Cenococcum geophilum free-living mycelium

OTHER RELATED OMICS DATASETS IN: GSE108866

PROVIDER: PRJNA428756 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR6446780.fastq.gz	Fastqsanger.gz
	SRR6446781.fastq.gz	Fastqsanger.gz
	SRR6446776.fastq.gz	Fastqsanger.gz
	SRR6446777.fastq.gz	Fastqsanger.gz
	SRR6446778.fastq.gz	Fastqsanger.gz

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Gene expression changes in Cenococcum geophilum 1.58-Populus tremulaxalba INRA 717-1B4 ectomycorrhizal roots compared to Cenococcum geophilum free-living mycelium

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Project description:Illumina HiSeq technology was used to generate mRNA profiles from Cenococcum geophilum ectomycorrhizal Pine roots, sclerotia and extramatrical mycelium compared to free-living mycelium . Ectomycorrhizal pine roots, sclerotia, extramatrical mycelium and control mycelium were harvested after 90 days and used for RNA extraction. Reads of 150bp were generated and aligned to the C. geophilum reference genome (https://genome.jgi.doe.gov/Cenge3/Cenge3.home.html).

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