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Coxiella burnetii

ABSTRACT: Genome Sequences of six Coxiella burnetii isolates from the United Kingdom

PROVIDER: PRJNA430350 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR6479430_1.fastq.gz	Fastqsanger.gz
	SRR6479430_2.fastq.gz	Fastqsanger.gz
	SRR6479431_1.fastq.gz	Fastqsanger.gz
	SRR6479431_2.fastq.gz	Fastqsanger.gz

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Coxiella burnetii

Project description:Genome Sequences of six Coxiella burnetii isolates from the United Kingdom

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Human THP-1 Cells: Uninfected vs. Coxiella burnetii NMII infected compared to Uninfected with Chloramphenicol vs. Coxiella burnetii NMII infected with Chloramphenicol

Project description:A comparison was made between the THP-1(Human monocytic leukemia cells - TIB-202; ATCC) transcriptional responses of; (i) uninfected versus Coxiella burnetii NMII infected and (ii) uninfected versus Coxiella burnetii NMII infected THP-1 cells transiently treated with bacteriostatic levels (10μg/ml) of chloramphenicol (CAM). Briefly, infections were initiated and cultured in parallel with uninfected cells. At 48 hours post infection (hpi), media containing CAM (10μg/ml) was added to one set of cells (uninfected and infected THP-1 cells) and culturing was continued. The other set of cells were mock treated with normal media. Total RNA was isolated at 72 hpi from all conditions. Microarrays were performed for both condition sets and the results from each of the two microarrays were compared to define the host genes modulated by de novo C. burnetii NMII protein synthesis.

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Project description:Transcriptional profiling of Coxiella burnetii phase I (RSA 493) submitting either to Cold and Heat shock comparing to control untreated Coxiella burnetii phase I (RSA 493) grown at 35Â°C. Four experiments : Cold shock 30 min Vs 35Â°C; Cold shock 60 min Vs 35Â°C; Heat shock 30 min Vs 35Â°C; Heat shock 60 min Vs 35Â°C 3 biological replicates, independently grown and harvested. Four replicate per array.

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