Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Next Generation Sequencing Facilitates Quantitative Analysis of seed development of Tartary buckwheat Transcriptomes

ABSTRACT: Next Generation Sequencing Facilitates Quantitative Analysis of seed development of Tartary buckwheat Transcriptomes

PROVIDER: PRJNA438646 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR6847700_1.fastq.gz	Fastqsanger.gz
	SRR6847700_2.fastq.gz	Fastqsanger.gz
	SRR6847701_1.fastq.gz	Fastqsanger.gz
	SRR6847701_2.fastq.gz	Fastqsanger.gz
	SRR6847702_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Next Generation Sequencing Facilitates Quantitative Analysis of seed development of Tartary buckwheat Transcriptomes

Project description:We generated 76.61 Gb of high-quality sequencing data (~8.51 Gb per sample) and catalogued the expression profiles of 9,765 annotated Tartary buckwheat genes in each sample. The analysis showed differences of transcriptomes during the development of buckwheat seed. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of buckwheat seed. Therefore, they are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to development.

2018-08-22 | GSE111937 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Seed Development of Easy Dehulling Tartary Buckwheat Transcriptomes

Project description:We generated 78.41 Gb of high-quality sequencing data (~8.71 Gb per sample) and catalogued the expression profiles of 9,765 annotated Tartary buckwheat genes in each sample. The analysis showed differences of transcriptomes during the development of easy dehulling buckwheat seed. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of easy dehulling buckwheat seed. Therefore, we are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to easy dehulling character.

2022-03-31 | GSE122540 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Tartary buckwheat Transcriptomes

Project description:We generated 61.9 Gb of high-quality sequencing data (~6.59 Gb per sample) and catalogued the expression profiles of 9,765 annotated Tartary buckwheat genes in each sample. The analysis showed differences of transcriptomes during the development of buckwheat. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of buckwheat. Therefore, we are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms.

2022-02-14 | GSE126576 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of Tartary buckwheat Transcriptomes

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of Tartary buckwheat Transcriptomes

| PRJNA522429 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of Seed Development of Easy Dehulling Tartary Buckwheat Transcriptomes

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of Seed Development of Easy Dehulling Tartary Buckwheat Transcriptomes

| PRJNA505505 | ENA

Changes of Gene expression in Tartary Buckwheat (Fagopyrum tataricum) under Frozen stress [RNA-Seq]

Project description:We performed a transcriptomics analysis in Tartary Buckwheat (Fagopyrum tataricum) in different freezing treatments

2020-03-08 | GSE138546 | GEO

Changes of Gene expression in Tartary Buckwheat (Fagopyrum tataricum) under Frozen stress [BS-Seq]

Project description:We performed a genome methylation analysis in Tartary Buckwheat (Fagopyrum tataricum) in different freezing treatments

2020-03-08 | GSE138497 | GEO

rhizosphere of tartary buckwheat

Project description:rhizosphere of tartary buckwheat Raw sequence reads

| PRJNA797228 | ENA

Transcriptome analysis of buckwheat seed developmental

Project description:Combining the Solexa/ Illumina RNA-seq high-throughput sequencing approach with Digital Gene Expression (DGE) analysis results in a powerful transcriptomic study. This publication reports the transcriptome profiling analysis of Fagopyrum esculentum Moench. using RNA-seq and DGE in order to better understand the molecular mechanisms underlying biological aspects of buckwheat, especially seed development and maturation.

2017-12-31 | GSE34314 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of root of original buckwheat (Fagopyrum hailuogouense) Transcriptomes

Project description:We generated 48.39 Gb of high-quality sequencing data (~8.07 Gb per sample). The analysis showed differences of transcriptomes between dormancy and growth stages of origina buckwheat roots. We identified numerous differentially expressed genes that exhibited distinct expression patterns. These genes have known or potential roles in development of origina buckwheat roots. Therefore, we are appealing candidates for further investigation of the gene expression and associated regulatory mechanisms related to asexual reproduction character.

2018-12-13 | GSE123374 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data