Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cutaneous T effector transcriptomic responses triggered by early colonization of Staphylococcus species in new-born mice

ABSTRACT: Cutaneous T effector transcriptomic responses triggered by early colonization of Staphylococcus species in new-born mice

PROVIDER: PRJNA471292 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7161260_1.fastq.gz	Fastqsanger.gz
	SRR7161260_2.fastq.gz	Fastqsanger.gz
	SRR7161270_1.fastq.gz	Fastqsanger.gz
	SRR7161270_2.fastq.gz	Fastqsanger.gz
	SRR7161261_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

Cutaneous T effector transcriptomic responses triggered by early colonization of Staphylococcus species in new-born mice

Project description:We used the next generation sequencing method to profile gene expression changes in cutaneous T effectors isolated from mice with early colonization with Staphylococcus aureus or Staphylococcus epidermidis

2018-12-25 | GSE114398 | GEO

KA120 negatively regulates effector-triggered immunity [RNA-seq]

Project description:KA120 negatively regulates effector-triggered immunity [RNA-seq]

| PRJNA616052 | ENA

Translational Regulation of Metabolic Dynamics during Effector-Triggered Immunity

Project description:Translational Regulation of Metabolic Dynamics during Effector-Triggered Immunity

| PRJNA510796 | ENA

Quantitative phosphoproteomic analysis reveals common regulatory mechanisms of immune components during effector- and PAMP-triggered immunity

Project description:The dataset for this project was to identify significantly regulated phosphorylation sites of membrane-associated proteins during RPS2-mediated effector-triggered immunity in Arabidopsis.

2018-10-11 | PXD010440 | Pride

Translational Regulation of Metabolic Dynamics during Effector-Triggered Immunity

Project description:It is not fully known whether translational regulation also occurs in later stage immune responses, such as effector-triggered immunity (ETI), which often leads to strong metabolic dynamics. In this study, we performed a genome-wide ribosome profiling in Arabidopsis upon ETI activation and discovered that specific groups of genes were translationally regulated, especially metabolic genes in aromatic amino acid, phenylpropanoid, camalexin, and sphingolipid metabolism. The involvement of these components in the induction of ETI was confirmed by genetic analysis, amino acid profiling and exogeneous application of phenylalanine or an inhibitor of aromatic amino acid biosynthesis. Our findings provide new insight into the diverse translational regulation in the plant immune responses and demonstrate that translational coordination of metabolic gene expression is an important strategy for ETI activation.

2020-12-16 | GSE124115 | GEO

T cell receptor-triggered nuclear actin network formation drives CD4 T cell effector functions

Project description:T cell receptor-triggered nuclear actin network formation drives CD4 T cell effector functions

| PRJNA505494 | ENA

Gene methylation profiles in offspring born before vs. after maternal bariatric surgery

Project description:Evaluate differences in gene methylation levels between offspring born after maternal bariatric surgery and their siblings born before surgery Offspring born after maternal bariatric surgery (AMS, N=25) vs. offspring born before maternal surgery (BMS, N=25)

2013-05-16 | E-GEOD-44798 | biostudies-arrayexpress

Gene expression profile in offspring born before vs. after maternal bariatric surgery

Project description:Evaluate differences in gene expression levels between offspring born after maternal bariatric surgery and their siblings born before surgery Offspring born after maternal bariatric surgery (AMS, N=23) vs. offspring born before maternal surgery (BMS, N=23)

2013-05-16 | E-GEOD-44407 | biostudies-arrayexpress

Heterogeneous fates of simultaneously-born neurons during early corticogenesis

Project description:We labelled isochronic cohorts of mouse cortical neurons and analyzed their contribution to the diversity of cortical neurons. We find that early born neurons contribute to a large diversity of cortical neuron subtypes, asa also confirmed by the transcsriptomic analysis of E13.5 born neurons through Patchseq. Ultimately we identify eaarly differentiation of early born neurons as the instance characterized by the highest tranascriptomical variability which intermingles deep layer identity genes with upper layer specific ones.

2022-12-18 | GSE142601 | GEO

Tracheal Colonization and Outcome After Major Abdominal Cancer Surgery

Project description:The goals of this study were to investigate whether two anesthesia regimens, with and without N2O, and bacterial colonization influence respiratory complications after major abdominal surgery for cancer.

| 2309559 | ecrin-mdr-crc

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data