Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fundulus grandis

ABSTRACT: Multi-generational study of crude oil embryotoxicity in developing embryos of Fundulus grandis

PROVIDER: PRJNA473014 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11530900_1.fastq.gz	Fastqsanger.gz
	SRR11530900_2.fastq.gz	Fastqsanger.gz
	SRR11531000_1.fastq.gz	Fastqsanger.gz
	SRR11531000_2.fastq.gz	Fastqsanger.gz
	SRR11531100_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 2257

Similar Datasets

Fundulus grandis

Project description:Fundulus grandis overview

| PRJNA168073 | ENA

Fundulus grandis

Project description:Fundulus grandis Raw sequence reads

| PRJNA437462 | ENA

Fundulus grandis

Project description:Fundulus grandis (taxid:34779) Transcriptome or Gene expression

| PRJNA167992 | ENA

BP oil spill - lab - gill

Project description:In this study we characterize the gill transcriptome changes in Gulf killifish (Fundulus grandis) that coincide with controlled laboratory-based exposure to various concentrations of experimentally-weathered south Louisiana crude oil. Gill transcription was contrasted between doses and across timepoints following dosing.

2014-08-11 | E-MTAB-2834 | biostudies-arrayexpress

BP oil spill - lab - liver

Project description:In this study we characterize the liver transcriptome changes in Gulf killifish (Fundulus grandis) that coincide with controlled laboratory-based exposure to various concentrations of experimentally-weathered south Louisiana crude oil. Liver transcription was contrasted between doses and across timepoints following dosing.

2014-08-13 | E-MTAB-2841 | biostudies-arrayexpress

Combined Developmental Effects of Environmental Stressors and Polycyclic Aromatic Hydrocarbons on Fundulus grandis Larvae

Project description:Oil spills have polluted the marine environment for decades and continue to be a major source of polycyclic aromatic hydrocarbons (PAHs) to marine ecosystems around the globe. Although the toxicity of PAHs to fish has been well studied, the combined effects of extreme abiotic factors and oil are poorly understood. Gulf of Mexico killifish Fundulus grandis larvae (< 24 hours post hatch) were exposed to varying environmental conditions (dissolved oxygen 2, 6 ppm; temperature 20, 25, 30°C; and salinity 3, 10, 30 ppt) combined with varying concentrations of high energy water accommodated fractions (HEWAF) (total PAHs 0 – ~ 125 ppb) for a total of 48 h. Larvae survival and development were negatively affected by PAHs, starting with the lowest concentration tested (~15 ppb). High temperature + hypoxia + PAHs resulted in the lowest survival with salinity having little impact on any of the endpoints tested. Expression of the hepatic detoxifying gene cyp1a was highly induced in PAH-exposed larvae, but only under normoxic conditions. A lack of cyp1a induction under hypoxia and PAH exposure could explain the enhanced toxicity observed. This work highlights the need for more studies examining the combined impact of suboptimal water quality parameters in the presence of pollution in fish early life-stages.

2019-04-18 | GSE129998 | GEO

Fundulus grandis strain:Gangs Bayou

Project description:Fundulus grandis strain:Gangs Bayou Genome sequencing

| PRJNA238141 | ENA

Fundulus grandis isolate:FGDS-UCD-2024

Project description:Fundulus grandis isolate:FGDS-UCD-2024 Genome sequencing

| PRJNA1067707 | ENA

Fundulus heteroclitus

Project description:Fundulus exposed to arsenic as embryos

| PRJNA140861 | ENA

BP oil spill - field - gill

Project description:In this study we characterize the gill transcriptome changes that coincide with the arrival of contaminating oil in field-collected Gulf killifish Fundulus grandis. Gill transcription was contrasted before and after the arrival of oil, and between oil impacted and reference sites. Animals were sampled from field sites at four times. The oil impacted site is Grand Terre Island Louisiana (GT) and the two reference sites are Bay St. Louis Mississippi (BSL) and Bayou La Batre Alabama (BLB). The first timepoint (05/01/2010 to 05/09/2010) was before the arrival of contaminating oil, the second and third timepoints (06/28/2010 to 06/29/2010, and 08/30/2010 to 09/01/2010) were after the arrival of contaminating oil, and the fourth timepoint 08/28/2011) was over a year after the arrival of contaminating oil.

2013-04-18 | E-MTAB-1622 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data