Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from diverse genera and geographic locations

ABSTRACT: Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from diverse genera and geographic locations

PROVIDER: PRJNA476917 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12213125_1.fastq.gz	Fastqsanger.gz
	SRR12213125_2.fastq.gz	Fastqsanger.gz
	SRR12213126_1.fastq.gz	Fastqsanger.gz
	SRR12213126_2.fastq.gz	Fastqsanger.gz
	SRR12213127_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 86

Similar Datasets

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Psychotria genus (Rubiacaeae) from Cuba

Project description:The leaf transcriptome of the nickel hyperaccumulator species Psychotria grandis and Psychotria costivenia (Rubiaceae) from Cuba were compared to the closely related non-accumulator Psychotria revoluta, living on Gallery forest on serpentine soil, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

2019-06-05 | GSE116050 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Phyllanthus genus (Phyllanthaceae) from New Caledonia.

Project description:The leaf transcriptome of the nickel hyperaccumulator Phyllanthus luciliae (Phyllanthaceae) endemic from New Caledonia was compared to the related non-accumulator Phyllanthus conjugatus var. ducosensis, living respectively on ultramafic and sedimentary soil, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

2020-08-17 | GSE154372 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Leucocroton and Lasiocroton genus (Euphorbiaceae) from Cuba

Project description:The leaf transcriptome of the nickel hyperaccumulator Leucocroton havanensis (Euphorbiaceae) living on serpentine Cuabal, from Cuba, was compared to the closely related non-accumulator Lasiocroton microphyllus living on Gallery forest on limestone soil, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

2019-06-05 | GSE116049 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Geissois genus (Cunoniaceae) endemic from New Caledonia

Project description:The leaf transcriptome of the nickel hyperaccumulator Geissois pruinosa (Rubiaceae) endemic from New Caledonia was compared to the closely related non-accumulator Geissois racemosa, living respectively in serpentine maquis or rainforest on limestone, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

2019-06-05 | GSE116048 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Homalium genus (Salicaceae) endemic from New Caledonia

Project description:The leaf transcriptome of the nickel hyperaccumulator species Homalium kanaliense (Salicaceae) endemic from New caledonia were compared to the closely related non-accumulator Homalium betulifolium, living on Gallery forest or maquis on serpentine soil, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

2019-06-05 | GSE116052 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Psychotria genus (Rubiacaeae) endemic from New Caledonia

Project description:The leaf transcriptome of the nickel hyperaccumulator Psychotria gabriellae (Rubiaceae) endemic from New Caledonia was compared to the closely related non-accumulator Psychotria semperflorens, living in sympatry with P. gabriellae in rain forest on serpentine soil, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

2019-06-05 | GSE116051 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from diverse genera and geographic locations

Project description:This SuperSeries is composed of the SubSeries listed below.

2019-06-05 | GSE116054 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Noccaea genus (Brassicaceae) from France

Project description:The leaf transcriptome of the nickel hyperaccumulator specie Noccaea caerulescens subsp. fimiensis living on serpentine soils were compared to the closely related non-nickel-accumulators Noccaea caerulescens "Viviez" growing on a zinc mining site and Noccaea montana living on serpentine soil, to identity differentially expressed genes potentially involved in Ni hyperaccumulation.

2019-06-05 | GSE115411 | GEO

Transcriptomic analysis of the nickel response in roots and shoots in the nickel hyperaccumulator Leucocroton havanensis (Euphorbiaceae) endemic from Cuba.

Project description:The goal of this study was to produce a reference transcriptome for the nickel hyperaccumulator Leucocroton havanensis endemic from Cuba and use this transcriptome as a reference to identify genes responding to the presence or the absence of nickel in both roots and shoots of this species

2024-07-10 | GSE237255 | GEO

Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Noccaea genus (Brassicaceae) from France

Project description:Transcriptomic comparison between nickel hyperaccumulator and non-accumulator plant species from the Noccaea genus (Brassicaceae) from France

| PRJNA474900 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data