Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Food fermentation metagenome

ABSTRACT: Whole metagenome sequencing and de novo assembly of complete genomes from natural whey cultures NWCs

PROVIDER: PRJNA477604 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR7585900_1.fastq.gz	Fastqsanger.gz
	SRR7585901_subreads.fastq.gz	Fastqsanger.gz
	SRR7585899_1.fastq.gz	Fastqsanger.gz
	SRR7585899_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

food fermentation metagenome

Project description:Whole metagenome sequencing and de novo assembly of complete genomes from natural whey cultures NWCs

| PRJNA454439 | ENA

Natural whey culture metagenome: bacteria, phages and plasmids from multiple species relevant for cheese fermentation

Project description:Whole metagenome sequencing and de novo assembly of complete genomes from natural whey cultures NWCs.

| PRJNA453664 | ENA

food fermentation metagenome

Project description:Microbial community of milk whey

| PRJNA311772 | ENA

RNA-Seq of mouse strains

Project description:The Mouse Genomes Project ( http://www.sanger.ac.uk/science/data/mouse-genomes-project ) uses using next-generation sequencing technologies to catalogue molecular variation in the common laboratory mouse strains, and a selected set of wild-derived inbred strains. Access to complete sequence of multiple inbred strains will add to these resources and will become a permanent foundation for a systems biology approach to phenotypic variation in the mouse. In this particular study, we have sequenced the transcriptome of whole-brain tissue from 16 laboratory mouse strains to examine differences in gene expression levels, differential RNA-editing, and for use in de novo gene prediction.

2011-03-29 | E-MTAB-615 | biostudies-arrayexpress

food fermentation metagenome

Project description:Metagenome-Assembled Genomes from cocoa beans fermentation

| PRJNA659258 | ENA

food fermentation metagenome

Project description:Microbial dynamics of fermented sausages as affected by starter cultures, nitrates and nitrites

| PRJNA434788 | ENA

Project description:Three de novo Lamiaceae genomes

| PRJNA814311 | ENA

Evaluating sequence alignment for metaproteomics applications

Project description:This dataset was utilized to assess the performance of a novel de novo metaproteomics pipeline, which performs sequence alignment of de novo sequences from complete metaproteomics experiments. Traditionally, metaproteomics data annotation relies on database searching that requires sample-specific databases derived from whole metagenome sequencing experiments. Creating these databases, however, is a complex, time-consuming, and error prone process, which can introduce biases affecting the outcomes and conclusions, highlighting the need for alternative methods. The evaluated approach offers rapid and orthogonal insights into metaproteomics data.

2024-10-10 | PXD050548 | Pride

Project description:De novo assemblies of Blaberidae genomes

| PRJNA1065107 | ENA

Mouse Genomes Project

Project description:Mouse Genomes Project, de novo assembly

| PRJEB15087 | ENA