Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Staphylococcus equorum strain:LMA-1258

ABSTRACT: Staphylococcus equorum LMA-1258 Genome sequencing and assembly

PROVIDER: PRJNA481364 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Staphylococcus equorum strain:LMA-1399

Project description:Staphylococcus equorum LMA-1399 Genome sequencing and assembly

| PRJNA481366 | ENA

Staphylococcus equorum strain:LMA-1443

Project description:Staphylococcus equorum LMA-1443 Genome sequencing and assembly

| PRJNA481770 | ENA

Staphylococcus equorum strain:LMA-1455

Project description:Staphylococcus equorum LMA-1455, genome sequencing and assembly

| PRJNA481774 | ENA

Differential expression of Staphylococcus equorum grown alone and in the presence of fungi

Project description:A specific interaction between the mold Scopulariopsis and S. equorum shifts the composition of the Staphylococcus community from dominance by a strong competitor, S. xylosus, to dominance by a weak competitor, S. equorum. To better understand specific genes and pathways involved with Scopulariopsis stimulation of S. equorum, we used RNA-seq to identify CDS that were up- and down-regulated in the genome of S. equorum in the presence and absence of the mold Scopulariopsis. We compared the effect of Scopulariopsis on the S. equorum transcriptome to the effect of Penicillium on the S. equorum transcriptome to determine why Scopulariopsis had such strong growth promotion effects relative to Penicillium. In the presence of both molds, Methionine biosynthesis and uptake pathways are strongly down-regulated, while Thiamine biosynthesis is up-regulated, suggesting that bacterial-fungal interactions alter the availability of free amino acids and nutrients in cheese environment for both partners. In the presence of Scopulariopsis only, there is a decrease in expression of genes involved with iron acquisition and the production of siderophores, notably the staphyloferrin B operon.

2016-09-27 | GSE75505 | GEO

Staphylococcus equorum subsp. equorum strain:G8HB1

Project description:Staphylococcus equorum subsp. equorum strain:G8HB1 Genome sequencing and assembly

| PRJNA275686 | ENA

Staphylococcus equorum subsp. equorum Mu2

Project description:Staphylococcus equorum subsp. equorum Mu2 Genome sequencing and assembly

| PRJEA88899 | ENA

Staphylococcus equorum

Project description:Staphylococcus equorum overview

| PRJNA89695 | ENA

Staphylococcus equorum strain:KM1031

Project description:Staphylococcus equorum KM1031 genome sequencing