Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Extended spectrum cephalosporin-resistant Escherichia coli on dairy farms

PROVIDER: PRJNA491471 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR26082453_1.fastq.gz	Fastqsanger.gz
	SRR26082453_2.fastq.gz	Fastqsanger.gz
	SRR26082454_1.fastq.gz	Fastqsanger.gz
	SRR26082454_2.fastq.gz	Fastqsanger.gz
	SRR26082455_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Project description:Extended-spectrum cephalosporin resistant Escherichia coli isolated from raccoons

| PRJNA662117 | ENA

Project description:Extended-spectrum cephalosporin resistant Escherichia coli isolated from domestic dogs

| PRJNA671493 | ENA

ESBL in Swiss pigs and farmers

Project description:Dynamics of Extended-spectrum cephalosporin-resistant E. coli in pig farms: a longitudinal study

| PRJEB40496 | ENA

ABRES dairy cattle

Project description:Dynamics of faecal shedding of Extended Spectrum beta-Lactamase or AmpC-producing Escherichia coli on dairy farms

| PRJEB30024 | ENA

Project description:162 Extended-Spectrum Cephalosporin (ESC) Resistance Genes in Escherichia coli Isolated from Poultry

| PRJNA1036573 | ENA

Lebanese broiler E. coli

Project description:A collection of extended-spectrum cephalosporinase (ESC)-resistant Escherichia coli sampled from 56 Lebanese broiler farms

| PRJEB43674 | ENA

Project description:Molecular Epidemiology of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli and Klebsiella species in Tennessee Dairy Farms

| PRJNA1011909 | ENA

null

Project description:Genomic surveillance of extended spectrum cephalosporin resistant Escherichia coli isolated from poultry in the UK from 2016-2020.

| PRJEB67810 | ENA

Project description:Escherichia coli from dairy cattle farms

| PRJNA1109610 | ENA

RNAseq transcriptome analysis of K. pneumoniae MS6671 and E. coli MS8345 treated with PBT2

Project description:The emergence of colistin resistance in carbapenem-resistant and extended-spectrum ß-lactamase (ESBL)-producing bacteria is a significant threat to human health, and new treatment strategies are urgently required. Here we investigated the ability of the safe-for-human use ionophore PBT2 to restore antibiotic sensitivity in several polymyxin-resistant, ESBL-producing, carbapenem resistant Gram-negative human pathogens. PBT2 was observed to resensitize Klebsiella pneumoniae, Escherichia coli, Acinetobacter baumannii, and Pseudomonas aeruginosa to last-resort polymyxin class antibiotics, including a ‘next generation’ polymyxin derivative, FADDI-287. To gain additional insight into the potential mechanism of action of PBT2, we analyzed the transcriptome of K. pneumoniae and E. coli in the presence of sub-inhibitory concentrations of PBT2. Treatment with PBT2 was associated with multiple stress responses in both K. pneumoniae and E. coli. Significant changes in the transcription of transition metal ion homeostasis genes were observed in both strains.

2019-06-13 | GSE132637 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data