Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: OXA-48-like K. pneumoniae producers

PROVIDER: PRJNA493254 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7905470_1.fastq.gz	Fastqsanger.gz
	SRR7905470_2.fastq.gz	Fastqsanger.gz
	SRR7905471_1.fastq.gz	Fastqsanger.gz
	SRR7905471_2.fastq.gz	Fastqsanger.gz
	SRR7905472_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 28

Similar Datasets

Project description:OXA-48-like producing Klebsiella pneumoniae in Singapore

| PRJNA1033449 | ENA

Project description:Sequences of Klebsiella pneumoniae isolates producing OXA-48

| PRJNA918858 | ENA

Klebsiella pneumoniae 1191100241

Project description:Klebsiella pneumoniae Oxa-48 strain 1191100241 Genome Sequencing Project

| PRJNA71587 | ENA

Klebsiella pneumoniae

Project description:OXA-48 producing Klebsiella pneumoniae, genome sequencing and assembly

| PRJNA419295 | ENA

null

Project description:OXA-48-producing Klebsiella pneumoniae in Lithuania in 2023

| PRJEB74083 | ENA

Rapid detection of beta-lactam, aminoglycoside and fluoroquinolone resistance mechanisms in blood cultures positive for E. coli or K. pneumoniae using targeted LC-MS/MS

Project description:New and rapid antimicrobial susceptibility/resistance testing methods are required for bacteria from positive blood cultures. In the current study we developed and evaluated a targeted LC-MS/MS assay for the detection of beta-lactam, aminoglycoside and fluoroquinolone resistance mechanisms in blood cultures positive for E. coli or K. pneumoniae. Selected targets were the beta-lactamases SHV, TEM, OXA-1-like, CTX-M-1-like, CMY-2-like, chromosomal E. coli AmpC, OXA-48-like, NDM, VIM and KPC, the aminoglycoside modifying enzymes AAC(3)-Ia, AAC(3)-II, AAC(3)-IV, AAC(3)-VI, AAC(6’)-Ib, ANT(2”)-I and APH(3’)-VI, the 16S-RMTases ArmA, RmtB, RmtC and RmtF, the quinolone resistance mechanisms QnrA, QnrB, AAC(6’)-Ib-cr, the wildtype QRDR of GyrA, and for E. coli, the porins OmpC and OmpF. The developed assay was evaluated using 100 prospectively collected positive blood cultures, 100 negative blood cultures inoculated with isolates that were previously collected from blood cultures, and 48 isolates inoculated with isolates carrying genes of less prevalent resistance mechanisms.

2022-07-01 | PXD025365 | Pride

Project description:Enterobacter OXA-48 bacteremia

| PRJNA773650 | ENA

Project description:Proteus mirabilis OXA-48

| PRJNA825519 | ENA

Project description:OXA-48-producing Klebsiella pneumoniae ST405 isolates Kp2 to Kp10.

| PRJNA391952 | ENA

Project description:Klebsiella spp. OXA-48 colonizations

| PRJNA859498 | ENA