Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera (RNA-seq)

ABSTRACT: Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera (RNA-seq)

PROVIDER: PRJNA493573 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR7908190.fastq.gz	Fastqsanger.gz
	SRR7908191.fastq.gz	Fastqsanger.gz
	SRR7908186.fastq.gz	Fastqsanger.gz
	SRR7908187.fastq.gz	Fastqsanger.gz
	SRR7908188.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera

Project description:Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera

| PRJNA493569 | ENA

Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera (ChIP-seq)

Project description:Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera (ChIP-seq)

| PRJNA493572 | ENA

Comparison of Apis mellifera workers and queens brain development at fourth instar larvae

Project description:In Apis mellifera, the female eggs can develop into workers or queen depending on the diet offered during early development. The outputs of the developed honeybee females are two morphs with particular morphological traits and related physiology. The differential feeding regime experienced by the queen and the worker larvae of the honeybee Apis mellifera shapes a complex endocrine response cascade that ultimately sets up differences in brain morphologies. Herein we report on aspects of brain morphogenesis during larval development and the brain gene expression signature of fourth instar larvae (L4) of both castes, a developmental stage characterized by the greatest differences in juvenile hormone (JH) titers between castes Using results from the hybridization of whole genome-based oligonucleotide arrays with RNA samples from brain of fourth instar larvae honeybees of both castes we present a list of differentially expressed genes.

2012-12-31 | GSE39239 | GEO

Comparison of Apis mellifera workers and queens brain development at fourth instar larvae

2012-12-31 | E-GEOD-39239 | biostudies-arrayexpress

Brain proteome of honeybee (Apis mellifera)

Project description:This project analysis brain proteome of honeybee (Apis mellifera). We aim to find out how gut microbiota affect brain functions.

2020-11-02 | PXD022304 |

Honey bee: Apis mellifera syriaca

Project description:Apis mellifera syriaca is the native honeybee subspecies of Jordan and much of the Middle East. It expresses behavioral adaptations to a regional climate with very high temperatures, nectar dearth in summer, attacks of the Oriental wasp Vespa orientalis and in most cases it is resistant to varroa mites. The Thorax control sample of A. m. syriaca in this experiment was originally collected and stored since 2001 from Wadi Ben Hammad a remote valley in the southern region of Jordan. Using morphometric and Mitochondrial DNA markers it was proved that bees from this area had show higher similarity than other samples collected from the Middle East as represented by reference samples collected in 1952 by Brother Adam. The samples L1-L5 are collected from the National Center for Agricultural Research and Extension breading apiary which was originally established for the conservation of Apis mellifera syriaca. Goal was to use the genetic information in the breeding for varroa resistant bees and to determine the successfulness of this conservation program. Project funded by USAID-MERC grant number: TA-MOU-09-M29-075.

2016-02-01 | GSE43554 | GEO

Transcription profiling by array of brains from Apis mellifera mellifera and Apis mellifera ligustica honey bees of different ages

Project description:Expression profiling of honey bees brains as a function of genotype ( Apis mellifera mellifera/Apis mellifera ligustica) and age

2010-12-31 | E-TABM-952 | biostudies-arrayexpress

Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera

Project description:This SuperSeries is composed of the SubSeries listed below.

2019-09-17 | GSE120563 | GEO

Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera (RNA-seq)

Project description:Female honeybees are specified as workers or queens based on diet during early development. Workers are essentially sterile with a reduced number of ovarioles and no spermatheca. In the presence of the queen (queen mandibular pheromone) and her brood, worker ovaries are kept in an inactive quiescent state. If the queen is removed, or lost, worker bees are able to sense this change in their environment and their ovaries undergo complete remodeling producing unfertilized haploid eggs that will produce male (drone bees). In this study we analyze gene expression in queen, worker, and laying worker ovaries using RNA-seq and explore differences in the chromatin landscape (focusing on H3K27me3).

2019-09-17 | GSE120561 | GEO

Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera (ChIP-seq)

Project description:Female honeybees are specified as workers or queens based on diet during early development. Workers are essentially sterile with a reduced number of ovarioles and no spermatheca. In the presence of the queen (queen mandibular pheromone) and her brood, worker ovaries are kept in an inactive quiescent state. If the queen is removed, or lost, worker bees are able to sense this change in their environment and their ovaries undergo complete remodelling producing unfertilised haploid eggs that will produce male (drone bees). In this study we analyse gene expression in queen, worker, and laying worker ovaries using RNA-seq and explore differences in the chromatin landscape (focussing on H3K27me3).

2019-09-17 | GSE120560 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data