Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Serratia sp. 1D1416

ABSTRACT: Serratia sp. 1D1416 Genome sequencing and assembly

PROVIDER: PRJNA493633 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR8217809_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

The transcriptome of Serratia sp. ZM under different concentrations of (NH4)2SO4

Project description:The RNA-seq technique aims to identify genes that are differently expressed in low nitrogen (2mM (NH4)2SO4) and high nitrogen (10mM (NH4)2SO4) conditions. Two groups of Serratia sp. ZM were analysed by us, low nitrogen group and high nitrogen group.

2015-11-01 | E-GEOD-72965 | biostudies-arrayexpress

Ambigols from the Cyanobacterium Fischerella ambigua increase Prodigiosin Production in Serratia sp.

Project description:Screening a library of 573 cyanobacteria extracts for inhibition of the quorum sensing regulated prodigiosin production of Serratia marcescens, an extract of the cyanobacterium Fischerella ambigua (Näg.) Gomont 108b was found to drastically increase the prodigiosin production. Bioactivity-guided isolation of the active compounds resulted in the two new natural products ambigol D and E along with the known ambigols A and C. Ambigol C treatment increased prodiginine production of Serratia sp. ATCC 39006 (S39006) by a factor of 10, while ambigols A and D were found to have antibiotic activity against this strain. RNA-Seq of S39006 treated with ambigol C and subsequent differential gene expression and functional enrichment analyses indicated a significant downregulation of genes associated with the translation machinery and fatty acid biosynthesis in Serratia, as well as increased expression of genes related to the uptake of l-proline. These results suggest that the ambigols increase the prodiginine production in S39006 not by activating the SmaIR quorum sensing system, but possibly by increasing the precursor supply of l-proline and malonyl-CoA.

2020-10-31 | GSE151437 | GEO

Serratia sp. PAMC26656

Project description:Serratia sp. PAMC26656 Genome sequencing and assembly

| PRJNA666007 | ENA

Serratia sp. RJAL6

Project description:Serratia sp. RJAL6 Genome sequencing and assembly

| PRJNA575626 | ENA

Serratia sp. H1w

Project description:Serratia sp. H1w Genome sequencing and assembly

| PRJNA226210 | ENA

Serratia sp. PL17

Project description:Serratia sp. PL17 Genome sequencing and assembly