Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Finfish communities associated with different oyster farming methods

PROVIDER: PRJNA498484 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8110860_1.fastq.gz	Fastqsanger.gz
	SRR8110860_2.fastq.gz	Fastqsanger.gz
	SRR8110870_1.fastq.gz	Fastqsanger.gz
	SRR8110870_2.fastq.gz	Fastqsanger.gz
	SRR8110880_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 96

Similar Datasets

miRNA of Pacific oyster Crassostrea gigas for different organs and developmental stages

Project description:miRNA sequencing of Pacific oyster Crassostrea gigas for different organs and developmental stages.

2014-07-26 | GSE31009 | GEO

Project description:Microbiome associated with sugarcane under different farming systems

| PRJNA682758 | ENA

Bacterial communities in different tillage methods

Project description:Bacterial communities in different tillage methods

| PRJEB46144 | ENA

Fungal communities in different tillage methods

Project description:Fungal communities in different tillage methods

| PRJEB46147 | ENA

Project description:Microbiome associated with sugarcane rhizosphere under different farming systems

| PRJNA873945 | ENA

RNA-seq of Pacific oyster Crassostrea gigas under different developmental stages and stress treatments

Project description:Deep sequencing of samples from different development stages, different adult organs and different stress treatments of Pacific oyster Crassostrea gigas

2012-09-13 | GSE31012 | GEO

Small Traditional Human Communities Sustain Genomic Diversity Over Microgeographic Scales Despite Linguistic Isolation

Project description:Illumina single nucleotide polymorphism (SNP) array data were generated to study genome-wide patterns of genomic variation on Sumba and Timor, two small islands in eastern Indonesia. Both islands have a complex history from their initial settlement ~50,000 years ago, to admixture with Austronesian-speaking groups during the Neolithic farming expansion, and more recent intra-island gene flow and community interactions. As part of this detailed microgeographic study, we also collected associated cultural and linguistic information. The primary study location was Sumba, for which we genotyped SNPs in 235 individuals from eight communities that span the island, including groups that speak most of Sumba’s nine languages. Particular attention was paid to genomic data that are informative for recent aspects of population history, including reconstructions of past gene flow, socio-genetic interactions and possible signals of selection.

2016-07-14 | GSE76645 | GEO

Project description:Diversities and shifts of protist communities associated with farming oyster (Crassostrea gigas) and surrounding environments in Laoshan Bay, China

| PRJNA797713 | ENA

Project description:Diversities and shifts of BACTERIAL communities associated with farming oyster (Crassostrea gigas) and surrounding environments in Laoshan Bay, China

| PRJNA797707 | ENA

Transcriptome assembly and gene expression profiling of Olympia oysters (Ostrea lurida) during low salinity exposure

Project description:Illumina RNA sequencing to assmeble a transcriptome for the oyster Ostrea lurida and identify genes signficantly differentially expressed among three populations of oysters that differ in their tolerance of low salinity. Our new transcripmotme provides an important genomic resource for future work in this species of conservation concern. Genes differentially expressed between oyster populations provide insight into mechanisms underlying different low salinity tolerances.

2018-04-28 | GSE98355 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data