Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Single-cell RNA sequencing of E12.5 mouse thalamus

ABSTRACT: Single-cell RNA sequencing of E12.5 mouse thalamus

PROVIDER: PRJNA503125 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8139233_1.fastq.gz	Fastqsanger.gz
	SRR8139233_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Single-cell RNA sequencing of E12.5 mouse thalamus

Project description:In this study we performed single-cell sequencing of E12.5 mouse diencephalon revealing different newly generated neurons and their associated molecular features.

2018-12-31 | GSE122012 | GEO

Single-cell sequencing of E12.5 mouse placenta

Project description:Single-cell sequencing of E12.5 mouse placenta

| PRJNA1141940 | ENA

Single-cell sequencing of E12.5 mouse placenta

Project description:In our study, we performed single-cell sequencing of the E12.5 mouse placenta to explore the cellular diversity and gene expression dynamics during placental development. This approach allowed us to delineate the complex landscape of cell types and states present at this critical stage of gestation. By analyzing the transcriptomic data, we identified several distinct trophoblast subpopulations, each characterized by unique gene expression patterns that suggest different functional roles in placental structure and function. Additionally, our data provided insights into the potential regulatory pathways involved in cell differentiation.

2024-10-31 | GSE273446 | GEO

Single cell RNA sequencing revealing gene expression profile of thalamus from mice at the age of 2 months

Project description:Single cell RNA transcriptomic expression profile of adult mouse thalamus cells containing astrocytes, oligodendrocytes, mural cells, endothelial cells, etc.

2024-08-05 | GSE269955 | GEO

single cell RNAseq of mouse E12.5 fetal ovarian somatic cells

Project description:single cell RNAseq of mouse E12.5 fetal ovarian somatic cells

| PRJNA998546 | ENA

Gene expression profile at single cell level of thalamus

Project description:Knowledge of the full repertoire of thalamus cells and their gene expression profiles is a fundamental first step in this endeavor. Here, using single-nuclei RNA sequencing (snRNA-seq), we sequenced the transcriptomes of 32332 single brain cells, revealing a total of four major cell types within the four thalamus sample from mice.

2023-05-10 | GSE227033 | GEO

A comprehensive single-cell map of mouse gonadal development at stages E10.5, E11.5 and E12.5 - 10x scRNAseq

Project description:Comprehensive single-cell map of mouse gonadal development at stages E10.5, E11.5 and E12.5

2022-05-03 | E-MTAB-11480 | biostudies-arrayexpress

Gbx2 is essential for maintaining thalamic neuron identity and repressing habenular characters in the developing thalamus

Project description:Using microarray, we compared the transcriptome of the wild-type and Gbx2-KO thalamus at E12.5. We show that Gbx2 promotes thalamic but inhibits habenular molecular characters.

2015-12-01 | GSE71690 | GEO

The lncRNA and mRNA sequencing result from mouse E12.5 cerebral cortex

Project description:To obtain the highly expressed lncRNA and mRNA at E12.5 cortice of mouse

2018-06-21 | GSE116056 | GEO

RNA-SEQ analysis of single cells extracted from E12.5 embryonic kidneys.

Project description:We used micro-dissection and trypsinization techniques to isolate single cells from the E12.5 total kidney. A subset of these single cell populations is analysed individually via Fluidigm single cell analysis. This analysis will determine the transcriptional profile of each cell type, identify compartment specific transcripts, compartment specific transcript isoforms and cell-type specific long-noncoding RNAs. In addition the unbiased nature of RNA-SEQ will potentially identify novel transcripts that have not been annotated in the database. E12.5 kidneys are dissected; the kidneys are made into a single cell suspension via trypsinization. A subset of these cells is analysed individually via Fluidigm C1 single cell analysis. The long term goal is to generate a single cell resolution transcriptional atlas of the developing kidney.

2014-08-01 | E-GEOD-59127 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data