Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

H3K4me3 and H3K27ac ChIp-seq

ABSTRACT: H3K4me3 and H3K27ac ChIp-seq

PROVIDER: PRJNA512869 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8392900_1.fastq.gz	Fastqsanger.gz
	SRR8392900_2.fastq.gz	Fastqsanger.gz
	SRR8392910_1.fastq.gz	Fastqsanger.gz
	SRR8392910_2.fastq.gz	Fastqsanger.gz
	SRR8392901_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

ChIP-seq of H3K4me3 and H3K27ac of dermal fibroblasts

Project description:ChIP-seq of H3K4me3 and H3K27ac of dermal fibroblasts

| PRJEB22016 | ENA

ChIP-seq of H3K27ac and H3K4me3 in HAP1 tRNA gene locus modified clones and control clones

Project description:This dataset contains ChIP-seq data profiling genomic binding of H3K27ac and H3K4me3 in single cell-derived control, as well as CRISPR/Cas9 induced tRNA gene deletion clones and intergenic region deletion clones in human cancer cell lines HAP1. In this study, we found a large genomic deletion of 10q23 in Cas9 modified clones and further investigate the effect of H3K27ac binding.

2023-10-24 | E-MTAB-11859 | biostudies-arrayexpress

H3K4me3, H3K27ac, EZH2 in K562

Project description:ChIP-seq of K562 cells: H3K4me3, H3K27ac, EZH2

| PRJEB72776 | ENA

Skeletal muscle myonuclei-specific ChIP-Seq of H3K4me3 and H3K27ac

Project description:Skeletal muscle myonuclei-specific ChIP-Seq of H3K4me3 and H3K27ac

| PRJNA757393 | ENA

HNF1A, H3K4me3 and H3K27ac ChIP-seq in control and Haster-deficient mouse livers

Project description:The HASTER promoter region is a cis-regulatory element that stabilizes the transcription of HNF1A, preventing silencing or overexpression. We have generated a mouse model where the promoter of Haster has been specifically deleted in liver (Haster loxP/loxP; AlbCre). In liver the prevailing consequence is upregulation of HNF1A. We performed HNF1A, H3K4me3 and H3K27ac ChIP-seq to assess the impact of HNF1A upregulation on the chromatin landscape of Haster KO liver.

2022-05-01 | E-MTAB-11471 | biostudies-arrayexpress

H3K4me3, H3K27ac and H3K4me1 ChIP-seq in 4 tissues of 10 mammals

Project description:To study the tissue-specific evolution of regulatory elements in the mammalian lineage, we created a comprehensive map of promoters and enhancers in 4 tissues of 10 mammalian species. To map in-vivo promoters and enhancers, we performed ChIP-seq experiments for H3K4me3, H3K27ac and H3K4me1 in adult liver, muscle, brain and testis of all 10 species. The species included in the study are: macaque, marmoset, mouse, rat, rabbit, pig, dog, cat, horse and opossum. To correlate regulatory evolution to expression, we also performed RNA-seq experiments in all tissues and species submitted separately to ArrayExpress.

2020-09-30 | E-MTAB-7127 | biostudies-arrayexpress

Chip-seq of H3K4me3, H3K4me1, H3K27ac and P300 in HCC cells

Project description:Considered as fundamental epigenetic regulators controlling many key cellular processes, histone modifications are a well-conserved and widely studied class of epigenetic modifications. Genome-wide studies have identified enhancers as DNA sequences that bind to H3K4me1 and H3K27ac and promoters as DNA sequences that bind to H3K4me3. To explore how the Twist1 complex (Twist1/YY1/p300) regulates miR-9 expression, we performed ChIP-seq in PLC-PRF-5 cells, providing a panorama of p300, H3K4me3, H3K4me1, and H3K27ac.

2022-07-21 | GSE208334 | GEO

Chip-seq of H3K4me3, H3K4me1, H3K27ac and P300 in HCC cells

Project description:Chip-seq of H3K4me3, H3K4me1, H3K27ac and P300 in HCC cells

| PRJNA859378 | ENA

ChIP-Seq for H3K27ac and H3K4me3 on T-Acute Lymphoblastic Leukemia

Project description:ChIP-Seq for H3K27ac and H3K4me3 on T-Acute Lymphoblastic Leukemia

| PRJNA827039 | ENA

Prostate H3K4me3 ChIP-seq

Project description:Prostate H3K4me3 ChIP-seq

| PRJNA557707 | ENA