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Tetrahymena malaccensis

ABSTRACT: A free-living freshwater ciliate

PROVIDER: PRJNA51613 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
		Other
	AFXY02.dat.gz	Other
	AFXY02.fasta.gz	Fasta.gz
	AFXY02.master.dat	Other
	SRR349788_1.fastq.gz	Fastqsanger.gz

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RNA-seq analysis of Tetrahymena thermophila

Project description:We present a comprehensive transcriptome of ciliate T. thermophila using the Illumina RNA-seq platform. The data was generated from the six mRNA samples of growth, starvation and conjugation of Tetrahymena. Despite an AT rich genome, there are about 124.6 million reads mapped to T. thermophila genome. Using these mapped reads, we have significantly improved the previous genome annotation and investigated the gene expression. Besides, our result also provided a comprehensive understanding of the alternative splicing in T. thermophila, and suggested the existence of the regulated unproductive splicing and translation (RUST) in the single-celled eukaryote.

2012-03-15 | GSE27971 | GEO

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