Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Evolution of hybridogenetic lineages in Cataglyphis ants

PROVIDER: PRJNA521233 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR8539900_1.fastq.gz	Fastqsanger.gz
	SRR8539900_2.fastq.gz	Fastqsanger.gz
	SRR8539897_1.fastq.gz	Fastqsanger.gz
	SRR8539897_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 39

Similar Datasets

Cataglyphis ants

Project description:Cataglyphis ants UCE sequencing

| PRJNA1087578 | ENA

Genome-wide analysis of global and caste-specific DNA methylation in two ant species: Camponotus floridanus and Harpegnathos saltator

Project description:This SuperSeries is composed of the following subset Series: GSE31344: smRNA sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator GSE31346: Transcriptome sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator GSE31576: Single base resolution methylome of two ants: Camponotus floridanus and Harpegnathos saltator Refer to individual Series

2012-08-08 | E-GEOD-31577 | biostudies-arrayexpress

Ants

Project description:Heat stress adaptation in ants from the genus Cataglyphis, Melophorus and Ocymyrmex

| PRJNA632584 | ENA

A chromatin link to caste identity in the carpenter ant Camponotus floridanus

Project description:The goal of this study was to assay the extent of variation in chromatin organization between 3 ant castes (major and minor female workers and males) in one colony of Camponotus floridanus carpenter ant using ChIPseq. 45 samples total: 30 ChIP samples and 3 inputs for total histone H3, 7 histone H3 PTMs and RNA Pol II in major, minor, and male ants; CBP in major and minor ants; the major H3K27ac sample was replicated. 4 ChIP samples for H3 and H3K27ac in brains of majors and minors, and 2 inputs. 2 RNAseq samples for major and minor ants head+thorax; 4 RNAseq samples for brain (majors and minors with 2 replicates each).

2012-11-26 | E-GEOD-37523 | biostudies-arrayexpress

Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior

Project description:Eusocial insects have evolved the capacity to generate adults with distinct morphological, reproductive and behavioural phenotypes from the same genome. Recent studies suggest that RNA editing might enhance the diversity of gene products at the post-transcriptional level, particularly to induce functional changes in the nervous system. Using head samples from the leaf-cutting ant Acromyrmex echinatior, we compare RNA editomes across eusocial castes, identifying ca. 11,000 RNA editing sites in gynes, large workers and small workers. Those editing sites map to 800 genes functionally enriched for neurotransmission, circadian rhythm, temperature response, RNA splicing and carboxylic acid biosynthesis. Most A. echinatior editing sites are species specific, but 8M-bM-^@M-^S23% are conserved across ant subfamilies and likely to have been important for the evolution of eusociality in ants. The level of editing varies for the same site between castes, suggesting that RNA editing might be a general mechanism that shapes caste behaviour in ants. Analysis of genome-wide RNA editing in three different female castes of the the leaf-cutting ant Acromyrmex echinatior.

2014-10-02 | E-GEOD-51576 | biostudies-arrayexpress

Small RNA sequencing and analysis of two ants: Camponotus floridanus and Harpegnathos saltator

Project description:Deep sequencing of small RNA from two Ants: Camponotus floridanus and Harpegnathos saltator

2010-08-27 | GSE22679 | GEO

smRNA sequencing of queen and virgin queen of two ants: Camponotus floridanus and Harpegnathos saltator

Project description:Deep sequencing of smRNA from queen and virgin queen of two Ants: Camponotus floridanus and Harpegnathos saltator

2012-08-09 | GSE31344 | GEO

Project description:Population genomics investigation of socially hybridogenetic lineages of Pogonomyrmex harvester ants

| PRJNA777360 | ENA

Cataglyphis holgerseni

Project description:Cataglyphis holgerseni

| PRJNA1065346 | ENA